Job Description P0A6A0 Confidence 99.15% Date Thu Jan 5 11:02:40 GMT 2012 Rank 260 Aligned Residues 248 % Identity 14% Template c3ll6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:cyclin g-associated kinase; PDBTitle: crystal structure of the human cyclin g associated kinase (gak) Resolution 2.10 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		F	E	I	K	P	L	A	S	A	S	I	A	Q	V	H	T	A	R	L	K	S	N	G	K	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	R	.	P	T	E	V	V	R	E	Y	E	K	T	L	I	D	E
Query Conservation																																																																		.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.													.										.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		L	R	V	R	R	V	L	A	E	G	F	A	F	V	Y	E	A	Q	D	V	G	S	G	R	E	Y	A	L	K	R	L	L	S	N	E	E	E	K	N	R	A	.	.	.	.	.	.	.	.	.	.	.	I	I	Q	E	V	C	F	M	K	K	L	S	G	H	P	N	I	V	Q	F	C	S	.	.	.	.	.	.
Template Known Secondary structure																					T	T	T												S	S							.	.	.	.	.	.	.	.	.	.	.												T	T	S	T	T	B						.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70												.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		L	N	L	L	R	E	S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	N	G	T	N	M	K	L	L	A	E	R	G	V	Q	V	.	.	.	.	.	F	F	T	Q
Query Conservation																																																																									.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	S	I	G	K	E	E	S	D	T	G	Q	A	E	F	L	L	L	T	E	L	C	K	G	Q	L	V	E	F	L	K	K	M	E	S	R	G	P	L	S	C	D	T	V	L	K	I	F	Y	Q	T	C	R	A	V	Q	H	M	H
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						G	G	G	S	T	T	S	S											S											T	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																						94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	R	D	S	F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D	S	G	W	V	P	P	D	T	N	V	E	E
Query Conservation
Alig confidence																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Q	K	P	P	I	I	H	R	D	L	K	V	E	N	L	L	L	S	.	.	.	.	N	Q	G	T	I	K	L	C	D	F	G	S	A	T	T	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Y	P	D	T	P	E	I	I	D	Y	S	N	F	P	I	G	E	K	Q	D	I	W	A
Template Known Secondary structure		T	S	S	S			B						G	G	G					.	.	.	.	T	T	S				B				T	T		B			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T								S		S					S	S
Template Predicted Secondary structure																					.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		F	E	F	A	I	R	T	V	C	E	P	I	F	E	K	P	.	.	L	A	E	I	S	F	G	H	V	L	L	N	L	F	N	T	A	R	R	F	N	M	E	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q	L	D	L	W	K	T	A	K
Query Conservation																		.	.
Alig confidence																		.	.																																									.
Template Conservation																																																												.
Template Sequence		L	G	C	I	L	Y	L	L	C	F	R	Q	H	P	F	E	S	I	P	P	H	D	T	Q	Y	T	V	F	H	S	L	I	R	A	M	L	Q	V	N	P	E	E	R	L	S	I	A	E	V	V	H	Q	L	Q	E	I	A	A	.	A	R	N	V	N	P	K	S	P	I	T	E	L	L	E
Template Known Secondary structure												S	S		S						T	T			S	S											S		S	S	G	G	G	S																.			T			T	T	S							T
Template Predicted Secondary structure																																																												.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions