Job Description P0A6A0 Confidence 99.29% Date Thu Jan 5 11:02:40 GMT 2012 Rank 250 Aligned Residues 250 % Identity 13% Template c3kmuA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:integrin-linked kinase; PDBTitle: crystal structure of the ilk/alpha-parvin core complex (apo) Resolution 1.80 Å

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		122	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		F	D	D	F	E	.	I	K	P	L	A	S	A	S	I	A	Q	V	H	T	A	R	L	K	S	N	G	K	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	R	P	T	E	V	V	R	E	Y	E	K	T	L
Query Conservation							.
Alig confidence							.																			.	.																.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Conservation																										.	.																.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template Sequence		F	K	Q	L	N	F	L	T	K	L	N	E	N	H	S	G	E	L	W	K	G	R	W	Q	.	.	G	N	D	I	V	V	K	V	L	K	V	R	D	W	S	.	.	.	.	.	.	.	.	.	T	R	K	S	R	D	F	N	E	E	C	P	R	L	R	I	F	S	H	P	N	V	L	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G											T	T									T	.	.	T											T	T			.	.	.	.	.	.	.	.	.											G	G	G	G				S		T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.																.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.	.	.	.	.	220	.	.	.	.	.	.	.	.										.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.
Query SS confidence																																																																									.	.	.
Query Sequence		I	D	E	L	N	L	L	R	E	S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	N	G	T	N	M	K	L	L	A	E	R	G	.	.	.	V	Q	V	F	F	T
Query Conservation																																																																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	L	G	A	C	Q	S	P	P	A	P	H	P	T	L	I	T	H	W	X	P	Y	G	S	L	Y	N	V	L	H	E	G	T	N	F	V	V	D	Q	S	Q	A	V	K	F	A	L	D	X	A	R	G	X	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	S	S	S									T	T		B							S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																											252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		278	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.				350	.	.
Predicted Secondary structure								.	.																																																																			.	.	.
Query SS confidence								.	.																																																																			.	.	.
Query Sequence		Q	V	F	R	D	S	.	.	F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D	S	G	W	.	.	.	V	P	P
Query Conservation								.	.																																																																			.	.	.
Alig confidence								.	.															.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	H	T	L	E	P	L	I	P	R	H	A	L	N	S	R	S	V	X	I	D	.	.	.	.	E	D	X	T	A	R	I	S	X	A	D	V	K	F	S	F	Q	S	.	.	.	.	.	.	.	.	.	.	.	P	G	R	X	Y	A	P	A	W	V	A	P	E	A	L	Q	K	K	P	E	D	T	N	R	R
Template Known Secondary structure				T	T	S	S	S			T	T				S	G	G	G					.	.	.	.	T	T	S						G	G	G	S			T	T	S		.	.	.	.	.	.	.	.	.	.	.	T	T			S		G	G	G	S							S		G	G	G	S
Template Predicted Secondary structure																								.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.												.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		D	T	N	V	E	E	F	E	F	A	I	R	T	V	C	E	P	I	F	E	K	P	L	A	E	I	S	F	G	H	V	L	L	N	L	F	N	T	A	R	R	F	N	M	E	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q	L	D	L	.	W	K	T	A	K	P
Query Conservation																																																																											.
Alig confidence																																																										.	.	.	.	.	.	.											.
Template Conservation																																																										.	.	.	.	.	.	.
Template Sequence		S	A	D	X	W	S	F	A	V	L	L	W	E	L	V	T	R	E	V	P	F	A	D	L	S	N	X	E	I	G	X	K	V	A	L	E	G	L	R	P	T	I	P	P	G	I	S	P	H	V	S	K	L	X	K	I	.	.	.	.	.	.	.	C	X	N	E	D	P	A	K	R	P	K	F	D	X	I	V	P
Template Known Secondary structure																			S		T	T	T	T	S												S								T	T												.	.	.	.	.	.	.		T		S	S	G	G	G	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.								.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		432	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	E	S	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	E	K	X
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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