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Job Description | P0A6A0 | Confidence | 24.01% | Date | Thu Jan 5 11:02:40 GMT 2012 |
Rank | 314 | Aligned Residues | 96 |
% Identity | 8% | Template | c3k3pA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:d-alanine--d-alanine ligase; |
PDBTitle: crystal structure of the apo form of d-alanine:d-alanine ligase (ddl)2 from streptococcus mutans
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Resolution | 2.23 Å |
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237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
S | E | G | M | M | V | M | E | R | I | Y | G | I | P | V | S | D | V | A | A | L | E | K | N | . |
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G | T | N | M | K | L | L | A | E | R | G | V | Q | V | F | F | T | Q | V | F | R | D | S | F | F | H | A | D | M | H | P | G | N | I | F | V | S | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
D | S | R | V | L | I | E | Q | G | V | D | A | R | E | I | E | V | G | I | L | G | N | T | D | V | K | T | T | L | P | G | E | I | V | T | M | A | I | P | A | E | I | D | P | V | I | V | E | K | M | R | D | Y | A | A | T | A | F | R | T | L | G | C | C | G | L | S | R | C | D | . |
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F | F | L | T | . |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | |
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299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
E | H | P | E | N | P | K | Y | I | G | I | D | C | G | I | V | G | S | L | N | K | E | D | K | R | Y | L | A | E | N | F | I | A | F | F | N | R | D | Y | R | K | V | A | E | L | H | V | D |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
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E | D | G | K | V | Y | L | N | E | L | N | T | M | P | G | F | T | . |
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S | M | Y | P | L | L | W | E | N | M | G | L | S | Y | S | V | L | I | E | E | L | V | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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294 | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | |
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. | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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