Job Description P0A6A0 Confidence 24.01% Date Thu Jan 5 11:02:40 GMT 2012 Rank 314 Aligned Residues 96 % Identity 8% Template c3k3pA_ PDB info PDB header:ligase Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: crystal structure of the apo form of d-alanine:d-alanine ligase (ddl)2 from streptococcus mutans Resolution 2.23 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	N	M	K	L	L	A	E	R	G	V	Q	V	F	F	T	Q	V	F	R	D	S	F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.					.
Template Conservation																																																																								.	.	.	.	.					.
Template Sequence		D	S	R	V	L	I	E	Q	G	V	D	A	R	E	I	E	V	G	I	L	G	N	T	D	V	K	T	T	L	P	G	E	I	V	T	M	A	I	P	A	E	I	D	P	V	I	V	E	K	M	R	D	Y	A	A	T	A	F	R	T	L	G	C	C	G	L	S	R	C	D	.	.	.	.	.	F	F	L	T	.
Template Known Secondary structure			S										S										S	S	S														S	S																						T	T									.	.	.	.	.					.
Template Predicted Secondary structure																																																																								.	.	.	.	.					.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D
Query Conservation
Alig confidence		.	.	.																		.	.	.	.	.
Template Conservation		.	.	.																		.	.	.	.	.
Template Sequence		.	.	.	E	D	G	K	V	Y	L	N	E	L	N	T	M	P	G	F	T	.	.	.	.	.	S	M	Y	P	L	L	W	E	N	M	G	L	S	Y	S	V	L	I	E	E	L	V	S
Template Known Secondary structure		.	.	.	T	T										S	S					.	.	.	.	.										T	T
Template Predicted Secondary structure		.	.	.																		.	.	.	.	.
Template SS confidence
					294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310						.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions