Job Description P0A6A0 Confidence 99.89% Date Thu Jan 5 11:02:40 GMT 2012 Rank 23 Aligned Residues 243 % Identity 15% Template c3fbvL_ PDB info PDB header:transferase, hydrolase Chain: L: PDB Molecule:serine/threonine-protein kinase/endoribonuclease ire1; PDBTitle: crystal structure of the oligomer formed by the kinase-ribonuclease2 domain of ire1 Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure															.																																																			.
Query SS confidence															.																																																			.
Query Sequence		F	E	I	K	P	L	A	S	A	S	I	A	Q	.	V	H	T	A	R	L	K	S	N	G	K	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	.	R	P	T	E	V	V	R	E	Y	E	K	T	L	I	D
Query Conservation															.																																																			.
Alig confidence															.						.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.												.											.	.	.	.	.
Template Conservation																					.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		V	S	E	K	I	L	G	Y	G	S	S	G	T	V	V	F	Q	G	S	.	.	F	Q	G	R	P	V	A	V	K	R	M	L	I	D	F	C	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	M	E	I	K	L	L	T	E	S	D	D	H	P	N	V	I	R	Y	Y	C	.	.	.	.	.
Template Known Secondary structure				S							T	T	T								.	.	S	S	S										G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S	T	T	B						.	.	.	.	.
Template Predicted Secondary structure																					.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.			.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.															.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.										260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.
Query Sequence		E	L	N	L	L	R	E	S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	.	.	.	.	.	.	.	.	.	N	G	T	N	M	K	L	L	A	E	R	G	V	Q
Query Conservation																																																											.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.											.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	T	T	D	R	F	L	Y	I	A	L	E	L	C	N	L	.	N	L	Q	D	L	V	E	S	K	N	V	S	D	E	N	L	K	L	Q	K	E	Y	N	P	I	S	L	L	R	Q	I	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T										S		.							T			S		S	T	T						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
																															734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750		.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300										.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.
Query Sequence		V	F	F	T	Q	V	F	R	D	S	F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	.	.	.	.	.	.	.	.	.	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H
Query Conservation																													.	.	.	.	.	.	.	.	.
Alig confidence		.																											.	.	.	.	.	.	.	.	.																																												.
Template Conservation		.																																																																															.
Template Sequence		.	G	V	A	H	L	H	S	L	K	I	I	H	R	D	L	K	P	Q	N	I	L	V	S	T	S	S	R	F	T	A	D	Q	Q	T	G	A	E	N	L	R	I	L	I	S	D	F	G	L	C	K	K	L	D	S	G	Q	F	R	N	L	N	N	P	S	G	T	S	G	W	R	A	P	E	L	L	E	E	S	.
Template Known Secondary structure		.								T	T							S	T	T	T											S			S	S		S							B				S	S					T	T	T									S	G	G	G	G	G							S	T	T	.
Template Predicted Secondary structure		.																																																																															.
Template SS confidence
			784	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		V	D	S	G	W	V	P	P	D	T	N	V	E	E	F	E	F	A	I	R	T	V	C	E	.	P	I	F	E	K	P	L	A	E	I	S	F	G	H	V	L	L	N	L	F	N	T	A	R	R	F	N	M	E	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q	L
Query Conservation																										.
Alig confidence		.																								.							.	.	.	.
Template Conservation		.																															.	.	.	.
Template Sequence		.	T	K	R	R	L	T	R	S	I	D	I	F	S	M	G	C	V	F	Y	Y	I	L	S	K	G	K	H	P	F	G	.	.	.	.	D	K	Y	S	R	E	S	N	I	I	R	G	I	F	S	L	D	E	M	K	C	L	H	D	R	S	L	I	A	E	A	T	D	L	I	S	Q	M	I	D	H	D	P	L	K
Template Known Secondary structure		.	T						T																T	T	S			T	T		.	.	.	.	S											T								T	T																		T		S	S	T	T	T
Template Predicted Secondary structure		.																															.	.	.	.
Template SS confidence
			893	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.					.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.
		424	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		968	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions