Job Description P0A6A0 Confidence 99.86% Date Thu Jan 5 11:02:40 GMT 2012 Rank 50 Aligned Residues 243 % Identity 11% Template c3dpkA_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrophage colony-stimulating factor 1 receptor; PDBTitle: cfms tyrosine kinase in complex with a pyridopyrimidinone2 inhibitor Resolution 1.95 Å

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																							.	.																																								.
Query SS confidence																							.	.																																								.
Query Sequence		K	P	L	A	S	A	S	I	A	Q	V	H	T	A	R	L	K	S	N	G	K	.	.	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	.	R	P	T	E	V	V	R	E	Y	E	K	T	L	I	D	E	L
Query Conservation																							.	.																																								.
Alig confidence																							.	.															.	.	.	.	.	.	.	.	.	.																.											.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Sequence		K	T	L	G	A	G	A	F	G	K	V	V	E	A	T	A	F	G	L	G	A	V	L	K	V	A	V	K	M	L	K	S	T	A	H	A	D	.	.	.	.	.	.	.	.	.	.	E	K	E	A	L	M	S	E	L	K	I	M	S	H	L	G	Q	H	E	N	I	V	N	L	L	G	.	.	.	.	.	.	.
Template Known Secondary structure								S	S										S														T	T					.	.	.	.	.	.	.	.	.	.																			T	T	B						.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template SS confidence
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.											.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	L	R	E	S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	N	G	T	N	M	K	L	L	A	E	R	G	V	Q	V	F	F	T	Q	V	F	R	D	S	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	C	T	H	G	G	P	V	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	Q	L	S	S	R	D	L	L	H	F	S	S	Q	V	A	Q	.	G	M	A	F	L	A	S	K	N	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S	S									T	T																										.								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template SS confidence
																													652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.		.	.	.	.	.	.	700	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D	S	G	W	V	P	P	D	T	N	V	E	E	F	E	F	A	I	R
Query Conservation
Alig confidence															.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.																										.	.	.	.	.	.	.	.
Template Sequence		I	H	R	D	V	A	A	R	N	V	L	L	T	.	.	.	.	N	G	H	V	A	K	I	G	D	F	G	L	A	R	D	I	M	N	D	S	N	Y	I	V	R	.	.	.	.	.	.	.	.	L	P	V	K	W	M	A	P	E	S	I	F	D	C	V	Y	T	V	Q	S	D	V	W	S	Y	G	I	L	L	W
Template Known Secondary structure				S			S	G	G	G					.	.	.	.	G	G	G								T	T	T	S		G	G	G		T	T	S	B			.	.	.	.	.	.	.	.	B		G	G	G	S
Template Predicted Secondary structure															.	.	.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		775	.	.	.	.	780	.	.	.	.	.	.	.					.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.									.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.			.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																			.	.																													.
Query SS confidence																																			.	.																													.
Query Sequence		T	V	C	E	P	I	F	E	K	P	L	A	E	I	S	F	G	H	V	L	L	N	L	F	N	T	A	R	R	F	N	M	E	.	.	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q	L	D	L	.	W	K	T	A	K	P	F	L	E	S
Query Conservation																																			.	.																													.
Alig confidence						.																													.	.												.	.	.	.	.	.	.											.
Template Conservation						.																																										.	.	.	.	.	.	.
Template Sequence		E	I	F	S	.	L	G	L	N	P	Y	P	G	I	L	V	N	S	K	F	Y	K	L	V	K	D	G	Y	Q	M	A	Q	P	A	F	A	P	K	N	I	Y	S	I	M	Q	A	.	.	.	.	.	.	.	C	W	A	L	E	P	T	H	R	P	T	F	Q	Q	I	C	S	F	L	Q	E
Template Known Secondary structure					T	.	T	S			S	S	T	T			S	S									T	T							T	T												.	.	.	.	.	.	.		T		S	S	G	G	G	S
Template Predicted Secondary structure						.																																										.	.	.	.	.	.	.
Template SS confidence
		847	.	.	850		.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.								.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions