Job Description P0A6A0 Confidence 99.78% Date Thu Jan 5 11:02:40 GMT 2012 Rank 120 Aligned Residues 236 % Identity 15% Template c3d4qA_ PDB info PDB header:transferase Chain: A: PDB Molecule:b-raf proto-oncogene serine/threonine-protein kinase; PDBTitle: pyrazole-based inhibitors of b-raf kinase Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	L	A	S	A	S	I	A	Q	V	H	T	A	R	L	K	S	N	G	K	E	V	V	I	K	V	I	R	P	D	I	L	P	V	I	K	A	D	L	K	L	I	Y	R	L	A	R	W	V	P	R	L	L	P	D	G	R	R	L	R	P	T	E	V	V	R	E	Y	E	K	T	L	I	D	E	L	N	L	L
Query Conservation
Alig confidence																	.	.	.																	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	G	S	G	S	F	G	T	V	Y	K	G	K	.	.	.	W	H	G	D	V	A	V	K	M	L	N	V	T	A	P	T	.	.	.	.	.	.	.	.	.	P	Q	Q	L	Q	A	F	K	N	E	V	G	V	L	R	K	T	R	H	V	N	I	L	L	F	M	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T								.	.	.	S	S	S									S	S	S			.	.	.	.	.	.	.	.	.															T	T				T	T	B					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.																	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.				.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.										.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																					.	.
Query SS confidence																																																																					.	.
Query Sequence		R	E	S	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	L	E	K	N	G	T	N	M	K	L	L	A	E	R	G	V	Q	V	.	.	F	F	T	Q	V	F	R	D	S	F	F
Query Conservation																																																																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	S	T	K	P	Q	L	A	I	V	T	Q	W	C	E	G	S	S	L	Y	H	H	L	H	I	I	E	T	K	F	E	M	I	K	L	I	D	I	A	R	Q	T	A	Q	G	M	D	Y	L	H	A	K	S	I	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S	S									S	S		B							T	S																										T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350				.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V	G	S	L	N	K	E	D	K	R	Y	L	A	E	N	F	I	A	F	F	N	R	D	Y	R	K	V	A	E	L	H	V	D	S	G	W	V	.	.	.	P	P	D	T	N	V	E	E	F	E	F	A
Query Conservation																																																																			.	.	.
Alig confidence														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	R	D	L	K	S	N	N	I	F	L	H	.	.	.	.	E	D	L	T	V	K	I	G	D	F	G	L	A	T	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	S	I	L	W	M	A	P	E	V	I	R	M	Q	D	K	N	P	Y	S	F	Q	S	D	V	Y	A	F	G	I	V
Template Known Secondary structure			S			S	G	G	G					.	.	.	.	T	T	T								T	T		B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T							T	T		S	S				S
Template Predicted Secondary structure														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.					.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.																	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.							.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.		.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.																																	.
Query SS confidence																																	.	.	.	.	.	.																																	.
Query Sequence		I	R	T	V	C	E	P	I	F	E	K	P	L	A	E	I	S	F	G	H	V	L	L	N	L	F	N	T	A	R	R	.	.	.	.	.	.	F	N	M	E	V	Q	P	Q	L	V	L	L	Q	K	T	L	L	Y	V	E	G	V	G	R	Q	L	Y	P	Q	L	D	L	.	W	K	T	A	K	P	F	L	E	S
Query Conservation																																	.	.	.	.	.	.																																	.
Alig confidence								.	.																								.	.	.	.	.	.																.	.	.	.	.	.	.											.
Template Conservation								.	.																																													.	.	.	.	.	.	.
Template Sequence		L	Y	E	L	M	T	.	.	G	Q	L	P	Y	S	N	I	N	N	R	D	Q	I	I	F	M	V	G	R	G	Y	L	S	P	D	L	S	K	V	R	S	N	C	P	K	A	M	K	R	L	M	A	E	.	.	.	.	.	.	.	C	L	K	K	K	R	D	E	R	P	L	F	P	Q	I	L	A	S	I	E	L
Template Known Secondary structure								.	.	S	S		T	T	T	T														T	S					G	G	G	S		T	T	S											.	.	.	.	.	.	.		T		S	S	G	G	G	S
Template Predicted Secondary structure								.	.																																													.	.	.	.	.	.	.
Template SS confidence
		646	.	.	.	650	.			.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.								.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.
		436	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	I	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	R	S
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		717	.	.	720

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions