Job Description P0A6A0 Confidence 94.40% Date Thu Jan 5 11:02:40 GMT 2012 Rank 298 Aligned Residues 104 % Identity 18% Template c2x6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphotidylinositol 3 kinase 59f; PDBTitle: the crystal structure of the drosophila class iii pi3-kinase2 vps34 in complex with pi-103 Resolution 3.50 Å

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		205	.	.	.	.	210							.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.																	.	.	.	260	.	.
Predicted Secondary structure								.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	L	R	E	S	.	.	.	.	.	.	A	N	A	I	Q	L	R	R	N	F	E	D	S	P	M	L	Y	I	P	E	V	Y	P	D	Y	C	S	E	G	M	M	V	M	E	R	I	Y	G	I	P	V	S	D	V	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	K	N	G	T
Query Conservation								.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																									.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		D	L	R	Q	D	Q	L	I	L	Q	M	I	T	L	M	D	K	L	L	R	R	E	N	L	D	L	K	L	T	P	Y	K	V	L	A	T	.	.	S	S	K	H	G	F	L	Q	Y	V	D	S	C	T	V	A	E	V	L	A	R	E	G	N	I	H	N	F	F	R	K	H	H	P	C	D	N	G	P	Y	G	I
Template Known Secondary structure																							T	T														.	.		T	T																			S	S	S												S	S	S	S	S	S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		702	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.			.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	K	L	L	A	E	R	G	V	Q	V	F	F	T	Q	V	F	R	D	S	F	F	H	A	D	M	H	P	G	N	I	F	V	S	Y	E	H	P	E	N	P	K	Y	I	G	I	D	C	G	I	V
Query Conservation
Alig confidence																																					.	.	.	.
Template Conservation																																					.	.	.	.
Template Sequence		S	A	E	V	M	D	T	Y	I	K	S	C	A	G	Y	C	V	I	T	Y	L	L	G	V	G	D	R	H	L	D	N	L	L	L	T	.	.	.	.	T	N	G	K	L	F	H	I	D	F	G	Y	I
Template Known Secondary structure																								T		B				T	T	T					.	.	.	.	T	T									S	B
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.					.	.	.	.	.	820	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions