Job Description P39832 Confidence 100.00% Date Thu Jan 5 12:00:57 GMT 2012 Rank 2 Aligned Residues 254 % Identity 17% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																					.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		I	E	L	L	F	P	G	W	L	A	G	I	M	L	A	C	A	A	G	P	L	G	S	F	V	V	W	R	R	M	S	Y	F	G	D	.	.	.	.	T	L	A	H	A	S	L	L	G	V	A	F	G	L	L	L	D	.	.	.	.	.	.	.	V	N	P	F	Y	A	V	I	A	V	T	L	L	L	A	G	G
Query Conservation																																					.	.	.	.																		.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F	E	N	P	L	A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L
Template Known Secondary structure				T																											T		T	T			T	T	T	T	T															T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		L	V	W	L	E	K	R	P	Q	L	A	I	D	T	L	L	G	I	M	A	H	S	A	L	S	L	.	.	G	L	V	V	V	S	L	M	S	N	I	R	V	D	L	M	A	Y	L	F	G	D	L	L	A	V	T	P	E	D	L	I	S	I	A	I	G	V	V	I	V	V	A	I	L	F	W	Q	W	R	N	L
Query Conservation																												.	.
Alig confidence																												.	.																																						.
Template Conservation																																																																			.
Template Sequence		L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	X	T	W	A	I	Y	F	S	T	S	V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	.	I	P	V	L	L	W	I	C	C	Q	S	R	P	X
Template Known Secondary structure								T																																									T				T	T			G	G	G								.
Template Predicted Secondary structure																																																																			.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	M	T	I	S	P	D	L	A	F	V	D	G	V	K	L	Q	R	V	K	L	L	L	M	L	V	T	A	L	T	I	G	V	A	M	K	F	V	G	A	L	I	I	T	S	L	L	I	I	P	A	A	T	A	R	R	F	A	R	T	P	E	Q	M	A	G	V	A	V	L	V	G	M	V	A	V	T	G	G
Query Conservation
Alig confidence																																																.
Template Conservation																																																.
Template Sequence		N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A	T	G	W	X	V	G	V	S	V	A	L	A	G	A	I	G	F	I	G	.	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	P	G	C	A	L	A	G	A	S	A	L	L	L	A
Template Known Secondary structure														T	T																														S	S	S	.	S									T	T			S
Template Predicted Secondary structure																																																.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		229	230	.	.	.					.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.
Query SS confidence							.	.	.	.
Query Sequence		L	T	F	S	A	.	.	.	.	V	Y	D	T	P	A	G	P	S	V	V	L	C	A	A	L	L	F	I	L	S	M	M	K
Query Conservation							.	.	.	.
Alig confidence							.	.	.	.
Template Conservation
Template Sequence		D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V	V	T	A	T	L	G	A	P	V	F	I	W	L	L	L	K
Template Known Secondary structure								S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions