Return to main results Retrieve Phyre Job Id

Job DescriptionP39832
Confidence1.71%DateThu Jan 5 12:00:57 GMT 2012
Rank79Aligned Residues16
% Identity19%Templatec2vi6F_
PDB info PDB header:transcriptionChain: F: PDB Molecule:homeobox protein nanog; PDBTitle: crystal structure of the nanog homeodomain
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   155....160.........170
Predicted Secondary structure 


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Query Sequence  PDLAFVDGVKLQRVKL
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Template Conservation    

  


    
  
Template Sequence  QELSSILNLSYKQVKT
Template Known Secondary structure  T

Template Predicted Secondary structure 


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   32.......40.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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