Job Description P39832 Confidence 100.00% Date Thu Jan 5 12:00:57 GMT 2012 Rank 1 Aligned Residues 255 % Identity 15% Template c2nq2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.																		.	.
Query SS confidence																																					.	.	.	.																		.	.
Query Sequence		I	E	L	L	F	P	G	W	L	A	G	I	M	L	A	C	A	A	G	P	L	G	S	F	V	V	W	R	R	M	S	Y	F	G	D	.	.	.	.	T	L	A	H	A	S	L	L	G	V	A	F	G	L	L	L	D	.	.	V	N	P	F	Y	A	V	I	A	V	T	L	L	L	A	G	G	L	V	W	L	E
Query Conservation																																					.	.	.	.																		.	.
Alig confidence																																					.	.	.	.																		.	.
Template Conservation
Template Sequence		F	Q	V	R	L	P	R	I	L	T	A	L	C	V	G	A	G	L	A	L	S	G	V	V	L	Q	G	I	F	R	N	P	L	V	N	P	H	I	I	G	V	T	S	G	S	A	F	G	G	T	L	A	I	F	F	G	F	S	L	Y	G	L	F	T	S	T	I	L	F	G	F	G	T	L	A	L	V	F	L	F
Template Known Secondary structure				T																										T	T		T	T			T	T	T	T	S															T	T
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		K	R	P	Q	L	A	I	D	T	L	L	G	I	M	A	H	S	A	L	S	L	G	L	V	V	V	S	L	M	.	.	.	S	N	I	R	V	D	L	M	A	Y	L	F	G	D	L	L	A	V	T	P	E	D	L	I	S	I	A	I	G	V	V	I	V	V	A	I	L	F	W	Q	W	R	N	L	L	S	M	T
Query Conservation																															.	.	.
Alig confidence																															.	.	.
Template Conservation
Template Sequence		S	F	K	S	L	L	M	L	I	L	I	G	M	I	L	S	G	L	F	S	A	L	V	S	L	L	Q	Y	I	S	D	T	E	E	K	L	P	S	I	V	F	W	L	M	G	S	F	A	T	S	N	W	E	K	L	L	F	F	F	V	P	F	L	L	C	S	S	I	L	L	S	L	S	W	R	L	N	L	L	S
Template Known Secondary structure			T																											S	S		T	T	T									T	T			S	T	T																							T	T	T	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	P	D	L	A	F	V	D	G	V	K	L	Q	R	V	K	L	L	L	M	L	V	T	A	L	T	I	G	V	A	M	K	F	V	G	A	L	I	I	T	S	L	L	I	I	P	A	A	T	A	R	R	F	A	R	T	P	E	Q	M	A	G	V	A	V	L	V	G	M	V	A	V	T	G	G	L	T	F	S
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		L	D	E	K	E	A	K	A	L	G	V	K	M	A	P	L	R	W	L	V	I	F	L	S	G	S	L	V	A	C	Q	V	A	I	S	G	S	I	G	W	V	G	.	L	I	I	P	H	L	S	R	M	L	V	G	A	N	H	Q	S	L	L	P	C	T	M	L	V	G	A	T	Y	M	L	L	V	D	N	V	A
Template Known Secondary structure		S								T	T																														S	S	T	.	T												S
Template Predicted Secondary structure																																												.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		233	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		A	V	.	.	.	Y	D	T	P	A	G	P	S	V	V	L	C	A	A	L	L	F	I	L	S	M	M	K
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		R	S	L	S	D	A	E	I	P	I	S	I	L	T	A	L	I	G	A	P	L	F	G	V	L	V	Y	K
Template Known Secondary structure				S		S	S
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions