Job Description P39832 Confidence 21.33% Date Thu Jan 5 12:00:57 GMT 2012 Rank 5 Aligned Residues 165 % Identity 15% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		E	L	L	F	P	G	W	L	A	G	I	M	L	A	C	A	A	G	P	L	G	S	F	V	V	W	R	R	M	S	Y	F	G	D	T	L	A	H	A	S	L	L	G	V	A	F	G	L	.	.	.	.	.	L	L	D	V	N	P	F	Y	A	V	I	A	V	T	L	L	L	A	G	G	L	V	W	L	E	K	R
Query Conservation																																																		.	.	.	.	.
Alig confidence																																																		.	.	.	.	.
Template Conservation
Template Sequence		D	V	A	I	N	A	V	V	V	T	N	T	S	A	A	V	A	G	F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	I	K	K
Template Known Secondary structure																														S																			T	T	T	T	T	T																											T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		P	Q	L	A	I	D	T	L	L	G	I	M	A	H	S	A	L	S	L	G	L	V	V	V	S	L	M	S	N	I	R	V	D	L	M	A	Y	L	F	G	D	L	.	.	L	A	V	T	P	E	D	L	I	S	I	A	I	G	V	V	I	V	V	A	I	L	F	W	Q	W	R	N	L	L	S	M	T	I	S	P
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		K	I	D	E	S	L	D	A	W	A	I	H	G	I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V	D	A	A	V	G	L	R	V	S	S
Template Known Secondary structure		T				T	T																											S				G	G	G	T																																		T		S	B
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	F	V	D	G	V	K	L	Q	R	V
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		Q	E	E	Y	V	.	G	L	D	L	S	Q	H
Template Known Secondary structure							.
Template Predicted Secondary structure							.
Template SS confidence
		374	.	.	.	.		.	380	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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