Job Description P39832 Confidence 3.89% Date Thu Jan 5 12:00:57 GMT 2012 Rank 15 Aligned Residues 106 % Identity 11% Template c1ymgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:lens fiber major intrinsic protein; PDBTitle: the channel architecture of aquaporin o at 2.2 angstrom resolution Resolution 2.24 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	P	F	Y	A	V	I	A	V	T	L	L	L	A	G	G	L	V	W	L	E	K	R	P	Q	L	A	I	D	T	L	L	G	I	M	A	H	S	A	L	S	L	G	L	V	V	V	S	L	M	S	N	I	R	V	D	L	M	A	Y	L	F	G	D	L	L	A	V	T	P	E	D	L	I	S	I	A	I	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	A	T	I	V	E	I	F	L	T	L	Q	F	V	L	C	I	F	A	T	Y	D	E	R	R	N	G	R	L	G	S	V	A	L	A	V	G	F	S	L	T	L	G	H	L	F	G	M	Y	Y	T	G	A	G	M	N	P	A	R	S	F	A	P	A	I	L	T	R	N	F	T	N	H	W	V	Y	W	V	G
Template Known Secondary structure																									T	T	S		S																																									T			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	V	V	A	I	L	F	W	Q	W	R	N	L	L	S	M	T	I	S	P	D	L	A	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	I	G	A	G	L	G	S	L	L	Y	D	F	L	L	F	P	R	L	K	S	V	S	E	R
Template Known Secondary structure															T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions