Job Description P08245 Confidence 7.15% Date Thu Jan 5 11:01:01 GMT 2012 Rank 46 Aligned Residues 88 % Identity 26% Template c3fzyA_ PDB info PDB header:toxin Chain: A: PDB Molecule:rtx toxin rtxa; PDBTitle: crystal structure of pre-cleavage form of cysteine protease domain2 from vibrio cholerae rtxa toxin Resolution 1.95 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																												.	.															.	.														.	.	.	.	.	.	.
Query SS confidence																																												.	.															.	.														.	.	.	.	.	.	.
Query Sequence		S	D	S	N	S	R	L	V	Y	S	T	E	T	G	R	I	D	E	P	K	A	A	P	V	R	P	K	G	D	G	V	V	R	I	Q	R	Q	T	S	G	R	K	.	.	G	K	G	V	C	L	I	T	G	V	D	L	D	D	.	.	A	E	L	T	K	L	A	A	E	L	K	K	K	.	.	.	.	.	.	.
Query Conservation																																												.	.															.	.														.	.	.	.	.	.	.
Alig confidence											.							.	.	.	.	.	.	.	.	.	.	.	.															.	.															.	.														.	.	.	.	.	.	.
Template Conservation											.							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	G	N	Y	R	V	V	Y	.	G	D	P	S	K	L	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	L	R	W	Q	L	V	G	H	G	R	D	H	S	E	T	N	N	T	R	L	S	G	Y	S	A	D	E	L	A	V	K	L	A	K	F	Q	Q	S	F	N	Q	A	E	N	I	N	N	K	P
Template Known Secondary structure		T	T	S							.	S		G	G	G		.	.	.	.	.	.	.	.	.	.	.	.		S	S											S			T	T	S					T	T	B																					T
Template Predicted Secondary structure											.							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3494	.	.	.	.	.	3500	.	.		.	.	.	.	.	.													.	3510	.	.	.	.	.	.	.	.	.	3520	.	.	.	.	.	.	.	.	.	3530	.	.	.	.	.	.	.	.	.	3540	.	.	.	.	.	.	.	.	.	3550	.	.	.	.	.	.	.	.	.	3560
							71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	C	G	C	G	G	A	V	K	D	G	V	I	E	I	Q	G	D	K	R	D	L	L	K	S	L	L	E	A	K	G	M	K	V	K	L	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.										.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		D	H	I	S	I	V	G	S	S	L	V	S	D	D	.	.	.	.	K	Q	K	G	F	G	H	Q	F	I	N	A	M	D	A	N	G	L	R	V	D	V	S
Template Known Secondary structure		S						S	S	S		S		T	T	.	.	.	.	S	S	S	S												T	T
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		3561	.	.	.	.	.	.	.	.	3570	.	.	.	.					.	.	.	.	.	3580	.	.	.	.	.	.	.	.	.	3590	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions