Job Description P08245 Confidence 3.56% Date Thu Jan 5 11:01:01 GMT 2012 Rank 94 Aligned Residues 55 % Identity 18% Template c2ziiA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 74; PDBTitle: crystal structure of yeast vps74-n-term truncation variant Resolution 3.05 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.															.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	G	V	C	L	I	T	G	V	D	L	D	D	A	E	L	T	K	L	A	A	E	L	K	K	K	C	G	C	G	G	A	V	K	D	G	V	I	E	I	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	R	D	L	L	K	S	L	L	E	A	K	G	M
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.
Template Sequence		E	R	L	I	E	V	I	D	S	S	K	T	G	E	V	L	L	D	E	T	L	Q	L	M	K	N	D	.	.	.	E	P	L	S	I	S	N	W	I	D	L	L	S	G	E	T	W	N	L	L	K	I	N	Y	Q	L	K	Q	V	R	E	R	L	A	K	G	L	V	D	K	G	V
Template Known Secondary structure		G	S					S			S			S													T	S	.	.	.													T	S					G	G	G	G	G	G	S			S												T	T	S
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions