Return to main results Retrieve Phyre Job Id

Job DescriptionP08245
Confidence69.76%DateThu Jan 5 11:01:01 GMT 2012
Rank9Aligned Residues52
% Identity21%Templatec1neeA_
PDB info PDB header:translationChain: A: PDB Molecule:probable translation initiation factor 2 beta PDBTitle: structure of archaeal translation factor aif2beta from2 methanobacterium thermoautrophicum
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50... ......60.........70.........80.........90.........
Predicted Secondary structure 


....















Query SS confidence 





. . . .













































Query Sequence  CLITGV. . . . DLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAK
Query Conservation 
 
 

....      
  


 


   





   
 



    
   
   
Alig confidence 





....













































Template Conservation 
 
 

 


  
 
 
  
 

   



   

  
 

 
      
   
  
Template Sequence  TFIQNFREVADALNRDPQHLLKFLLRELGTAGNLEGGRAILQGKFTHFLINERIED
Template Known Secondary structure  S

SS

S



BTTTSS
SSS
Template Predicted Secondary structure 











Template SS confidence 























































   3940.........50.........60.........70.........80.........90....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions