Return to main results Retrieve Phyre Job Id

Job DescriptionP37631
Confidence99.67%DateThu Jan 5 11:56:04 GMT 2012
Rank64Aligned Residues218
% Identity26%Templated1v59a1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD/NAD-linked reductases, N-terminal and central domains
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1.. ......10.........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 

.




































Query SS confidence 


.











































































Query Sequence  MER. FDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQ
Query Conservation 

 . 







 


 

  
   
  
 



    

                                       
Alig confidence 


.








































.......................











Template Conservation 
   












 

  
   
  
 


     

    .......................            
Template Sequence  INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN. . . . . . . . . . . . . . . . . . . . . . . VGCIPSKALLNN
Template Known Secondary structure 

STT

SSSSSS.......................S
Template Predicted Secondary structure 


















.......................











Template SS confidence 















































































   2.......10.........20.........30.........40...... ...50........
 
   80.........90.........100....... ..110.........120.........130.........140.........150
Predicted Secondary structure 
















.........











Query SS confidence 



























. . . . . . . . .










































Query Sequence  WDFIDLVNKHGIAWHEKTLGQLFCDDSA. . . . . . . . . QQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTV
Query Conservation            
                 .........                 
     
  
                
Alig confidence 



























.........




















......................
Template Conservation                         
                            
    
......................
Template Sequence  SHLFHQMHTEAQKRGIDVNGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKG. . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TSGGGT



S




TT
S......................
Template Predicted Secondary structure 


















......................
Template SS confidence 















































































   5960.........70.........80.........90.........100.........110......
 
   151........160.........170.........180.........190.........200.........210.........220.........230
Predicted Secondary structure 























































Query SS confidence 















































































Query Sequence  GCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLF
Query Conservation           
                
   
                                       
         
Alig confidence  ................................















































Template Conservation  ................................                                
               
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NGSFEDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEVTPFVGRR
Template Known Secondary structure  ................................SSSS

TT
TT

SS








Template Predicted Secondary structure  ................................

































Template SS confidence 















































































   117..120.........130.........140.........150.........160....
 
   231........240.........250.........260.........270.........280.........290.........300.........310
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  THRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLN
Query Conservation                                                                                  
Alig confidence 















................................................................
Template Conservation              
   ................................................................
Template Sequence  PYIAGLGAEKIGLEVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TTS
TTTTT

B
................................................................
Template Predicted Secondary structure 











................................................................
Template SS confidence 















































































   287..290.........300..
 
   311........320.........330.........340.........350.........360.........370.........380.........390
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  VRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWAC
Query Conservation                                 


  
           
 






     
  

     
  

  
Alig confidence  .............................








.....
















.....














Template Conservation  .............................  
 
 

 .....   

   


 

   .....
      
   
  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KRGRLVIDD. . . . . QFNSKFPHIKVVGDVTF. . . . . GPMLAHKAEEEGIAA
Template Known Secondary structure  .............................TTS
B


T.....TSB
SSTT
GGGSS.....S


Template Predicted Secondary structure  .............................





.....












.....
Template SS confidence 















































































   303......310. ........320........ .330.........340...
 
   391.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  AQDLIAAK
Query Conservation 
  
    
Alig confidence 







Template Conservation 
  
    
Template Sequence  VEMLKTGH
Template Known Secondary structure  S
Template Predicted Secondary structure 



Template SS confidence 







   344.....350.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions