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Job DescriptionP37631
Confidence99.75%DateThu Jan 5 11:56:04 GMT 2012
Rank33Aligned Residues215
% Identity26%Templatec3o0hA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutathione reductase; PDBTitle: crystal structure of glutathione reductase from bartonella henselae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70........
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Query Sequence  MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFT. .
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Template Sequence  FD. FDLFVIGSGSGGVRAARLAGALGKRVAIAEEYRIGGTCV. . . . . . . . . . . IRGCVPKKLYFYASQYAQEFSKSIGFG
Template Known Secondary structure 
S.

STT

SS
TT...........SGGGT
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   4. ....10.........20.........30.........40.... .....50.........60.........70.
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
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Template Sequence  WKYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIVSNIKG
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TT
S
TTTTT








BT
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   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   7980.........90.........100.........110.........120.........130
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . QWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSE
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Template Sequence  SDLCLTSNEIFDLEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEAT
Template Known Secondary structure  GGGSB
TTTGGG
SS

S

STT

SSSSSSTTS
T
SS

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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   131........140........ .150.........160.........170.........180.........190.........200.........
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Query Sequence  VLSVAKDETGFTLDLNGM. TVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAG
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Template Sequence  VSQVQSTENCYNVVLTNGQTICADRVMLATG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
SSSTTS
S


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   234.....240.........250.........260....
 
   210.........220.........230.........240.........250.........260.........270.........280.........
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Query Sequence  VAVPSVITAENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPK
Query Conservation             
                                                                    
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  RLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RVPNTTGLGLERAGVKVNEFGAVVVDE. . . . . KMTTNVSHIWAVGDVT
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TT

T

B
TTS
B


T.....TSB
SSTT
GGGG
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   265....270.........280.........290. ........300.......
 
   370.........380.........390........
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Query Sequence  DVTGWLGGYNFQWAWSSAWACAQDLIAAK
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Template Sequence  GHIQL. . . . . TPVAIHDAMCFVKNAFETT
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   308.310.. .......320.........330.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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