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Job DescriptionP37631
Confidence99.67%DateThu Jan 5 11:56:04 GMT 2012
Rank65Aligned Residues330
% Identity17%Templatec3l8kB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of a dihydrolipoyl dehydrogenase from2 sulfolobus solfataricus
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQW
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Template Sequence  LK. YDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSG. . . . . . . . . . . . . . . . . . . . . . . CVPSKTVREVI
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STT

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   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  DFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATG
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Template Sequence  QTAWRLTNIAIPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASG
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TT
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   57..60.........70.........80.........90.........100.........110.........120.........130......
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAV
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Template Sequence  AE. . . . . . . . . . . . . . . . . . . . . TAKLRLPGVEYCLTSDDIFGYKTSFRKLPQDMVIIGAG. . . . . . . . . . . . . . . YIGL
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TTGGG
B
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   140. ........150.........160.........170......... 180...
 
   241........250.........260.........270.........280.........290.........300.........310.........320
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Query Sequence  LQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALIST
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Template Sequence  EIASIFRLMGVQTHIIEMLDRALITLEDQDIVNTLLSILKLNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVV
Template Known Secondary structure  TT

SSSSS
TTS





S

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S
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   184.....190.........200.........210.........220.........230.........240.........250.........260...
 
   321........330...... ...340.........350.........360.........370.........380.........390.........
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Query Sequence  LTDWRVQPNGTEGYRT. AEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKS
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Template Sequence  LAAGRRPVIPEGAREIGLSISKTGIVVDE. . . . . TMKTNIPNVFATGDANGLAPY. . . . . YHAAVRMSIAAANNIMANGM
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TTTTTTT

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SSSB


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   264.....270.........280.........290.. .......300.........310... ......320.........330...
 
   400
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Query Sequence  S
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Template Sequence  P
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   334
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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