Job Description P37631 Confidence 99.38% Date Thu Jan 5 11:56:04 GMT 2012 Rank 134 Aligned Residues 300 % Identity 16% Template c3ef6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:toluene 1,2-dioxygenase system ferredoxin--nad(+) PDBTitle: crystal structure of toluene 2,3-dioxygenase reductase Resolution 1.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		D	A	I	I	I	G	A	G	A	A	G	M	F	C	S	A	L	A	G	Q	A	G	R	.	.	R	V	L	L	I	D	N	G	K	K	P	G	R	K	I	L	M	S	G	G	G	R	C	N	F	T	N	L	Y	V	E	P	G	A	Y	L	S	Q	N	P	H	F	C	K	S	A	L	A	R	F	T	Q	W	D	F
Query Conservation																									.	.
Alig confidence																									.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	A	I	I	G	N	G	V	G	G	F	T	T	A	Q	A	L	R	A	E	G	F	E	G	R	I	S	L	I	G	D	E	P	H	L	P	Y	D	R	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S													T	T			S								S	S	S	S	S	B		S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	L	V	N	K	H	G	I	A	W	H	E	K	T	L	G	Q	L	F	C	D	D	S	A	Q	Q	I	V	D	M	L	V	D	E	C	E	K	G	N	V	T	F	R	L	R	S	E	V	L	S	V	A	K	D	E	T	G	F	T	L	D	L	N	G	M	T	V	G	C	E	K	L	V	I	A	T	G	G	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	K	A	V	L	D	G	S	L	E	R	P	P	I	L	A	E	A	D	W	Y	G	E	A	R	I	D	M	L	T	G	P	E	V	T	A	L	D	V	Q	T	R	T	I	S	L	D	D	G	T	T	L	S	A	D	A	I	V	I	A	T	G	S	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T					T	S	S	S	S			B	S	S		T	T					T	T						S								T	T	T	T					T	T	S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	P	G	L	G	A	S	P	F	G	Y	K	I	A	E	Q	F	G	L	N	V	L	P	T	R	A	G	L	V	P	F	T	L	H	K	P	L	L	E	E	L	Q	V	L	A	G	V	A	V	P	S	V	I	T	A	E	N	G	T	V	F	R	E	N	L	L	F	T	H	R	G	L	S	G	P	A	V	L	Q
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	P	G	S	Q	L	P	G	V	V	T	L	R	T	Y	G	D	V	Q	V	L	R	D	S	W	T	S	A	T	R	L	L	I	V	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	G	C	E	V
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T	T	S	T	T						S													T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.																			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	S	Y	W	Q	P	G	E	F	V	S	I	N	L	L	P	D	V	D	L	E	T	F	L	N	E	Q	R	N	A	H	P	N	Q	S	L	K	N	T	L	A	V	H	L	P	K	R	L	V	E	R	L	Q	Q	L	G	Q	I	P	D	V	S	L	K	Q	L	N	V	R	D	Q	Q	A	L	I	S	T	L	T
Query Conservation
Alig confidence																																																																													.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		A	T	T	A	R	K	L	G	L	S	V	T	I	L	E	A	G	D	E	L	L	V	R	V	L	G	R	R	I	G	A	W	L	R	G	L	L	T	E	L	G	V	Q	V	E	L	G	T	G	V	V	G	F	S	G	E	G	Q	L	E	Q	V	M	A	S	D	G	R	S	F	V	A	D	S	A	.	.	.	L	I
Template Known Secondary structure								T	T								S	S	S	S	S	S																				T						S									S	S	S							T	T	S						S			.	.	.
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.				.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.					.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		D	W	R	V	Q	P	N	G	T	E	G	Y	R	T	A	E	V	T	L	G	G	V	D	T	N	E	L	S	S	R	T	M	E	A	R	K	V	P	G	L	Y	F	I	G	E	V	M	D	V	T	G	W	L	G	G	Y	.	.	.	.	N	F	Q	W	A	W	S	S	A	W	A	C	A	Q	D	L	I	A	A
Query Conservation																																																										.	.	.	.
Alig confidence																												.	.	.	.	.																										.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		C	V	G	A	E	P	A	D	Q	L	A	R	Q	A	G	L	A	C	D	R	G	V	I	V	D	H	.	.	.	.	.	C	G	A	T	L	A	K	G	V	F	A	V	G	D	V	A	S	W	P	L	R	A	G	G	R	R	S	L	E	T	Y	M	N	A	Q	R	Q	A	A	A	V	A	A	A	I	L	G	K
Template Known Secondary structure			S												T	T			B	S	S	S					T	.	.	.	.	.	T	S	B		S	S	T	T					G	G	G					B	T	T	S	S																						T	T
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions