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Job DescriptionP37631
Confidence99.59%DateThu Jan 5 11:56:04 GMT 2012
Rank91Aligned Residues313
% Identity14%Templatec3ab1B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:ferredoxin--nadp reductase; PDBTitle: crystal structure of ferredoxin nadp+ oxidoreductase
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  ERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWD
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Template Sequence  DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALY. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   13......20.........30.........40.........50.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  FIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATGG
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Template Sequence  . . . . . . . . . . PEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAA
Template Known Secondary structure  ..........TTS

BTTBSSGGG


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   58.60.........70.........80.........90.........100.........110.........120.......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  LSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAVL
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Template Sequence  GLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGHGKTAHE
Template Known Secondary structure  TTS


GGG


TTTBTTTSS
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GGGGTT

SSTTTTSSSSSS
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   128.130.........140.........150.........160.........170.........180.........190.........200.......
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  QISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTL
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Template Sequence  VERARANGTIDVYLETEVASIEES. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NGVLTRVHLRSSDGSKWTVEADRLLI
Template Known Secondary structure  TTSST
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   208.210.........220.........230. ........240.........250.......
 
   322.......330.........340.........350.........360.........370.........380.........390......
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Query Sequence  TDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIA
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Template Sequence  LIGFKSNLGPLARWDLELYENALVVDS. . . . . HMKTSVDGLYAAGDIAYYPGKLKI. . IQTGLSEATMAVRHSLS
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TSSS
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   258.260.........270.........280.... .....290.........300........ .310.........320.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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