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Job DescriptionP37631
Confidence99.67%DateThu Jan 5 11:56:04 GMT 2012
Rank66Aligned Residues216
% Identity29%Templatec2r9zB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glutathione amide reductase; PDBTitle: glutathione amide reductase from chromatium gracile
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70........
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Query Sequence  ERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFT. . .
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Template Sequence  QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKALGGTCV. . . . . . . . . . . NVGCVPKKVMWYASHLAEAVRDAPGFGV
Template Known Secondary structure 



STT

SS
TT...........SGGGGT
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   3......10.........20.........30.........40... ......50.........60.........70.
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                              
   
Template Sequence  QASGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEVEGQRLSADHIVIATGGRPIVPRLPGAEL
Template Known Secondary structure 






TT
S
TTTT





S
TTGGG
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   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   7980.........90.........100.........110.........120.........130...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . QWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLS
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Template Sequence  GITSDGFFALQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAA
Template Known Secondary structure  SB

SS

S

STT

SSSSSSTTS
T
SS

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   153......160.........170.........180.........190.........200.........210.........220.........230..
 
   134.....140..... ....150.........160.........170.........180.........190.........200.........210.
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Query Sequence  VAKDETGFTLDL. . NGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVA
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Template Sequence  LERDAQGTTLVAQDGTRLEGFDSVIWAVG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TT

TT

B


BS
S
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   233......240.........250.........260.
 
   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  VPSVITAENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   292.......300.........310.........320.........330.........340.........350.........360.........370.
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Query Sequence  VERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDV
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RAPNTRDLGLEAAGIEVQSNGMVPTDA. . . . . YQNTNVPGVYALGDITGR
Template Known Secondary structure  ..............................S
TTS
T



TTS




T.....TSB
SSTT
GGGGSS
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   262.......270.........280........ .290.........300......
 
   372.......380.........390.........
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Query Sequence  TGWLGGYNFQWAWSSAWACAQDLIAAKS
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Template Conservation     .....   
   
  

  
     
Template Sequence  DQL. . . . . TPVAIAAGRRLAERLFDGQS
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.....S

T
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   307.. 310.........320.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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