Return to main results Retrieve Phyre Job Id

Job DescriptionP37631
Confidence99.52%DateThu Jan 5 11:56:04 GMT 2012
Rank107Aligned Residues163
% Identity17%Templatec2r4jA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap
Resolution1.96 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70........
Predicted Secondary structure 






































..
Query SS confidence 













































































. .
Query Sequence  MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFT. .
Query Conservation 

  







 


 

  
   
  
 



    

                                      ..
Alig confidence 













































































..
Template Conservation 

  








 
   
  

  
  
 



 
   


  





 
          
   
      
      
Template Sequence  METKDLIVIGGGINGAGIAADAAGRGLSVLXLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKXAPH
Template Known Secondary structure 



STTT


SSSTT
SGGGSS




GGGGGGT

TT
Template Predicted Secondary structure 
































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   7980.........90.........100....... ..110.........
Predicted Secondary structure  ....................
















...................

Query SS confidence  . . . . . . . . . . . . . . . . . . . .




























. . . . . . . . . . . . . . . . . . .











Query Sequence  . . . . . . . . . . . . . . . . . . . . QWDFIDLVNKHGIAWHEKTLGQLFCDDSA. . . . . . . . . . . . . . . . . . . QQIVDMLVDECE
Query Conservation  ....................           
                 ...................            
Alig confidence  ....................




























...................











Template Conservation                                                          
      
 
 
  
  

   
 
Template Sequence  IAFPXRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQXVV
Template Known Secondary structure  T

TTTS
SS

SSS




TTSSB
TT


Template Predicted Secondary structure 






































Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   120.........130.........140......... 150.........160...
Predicted Secondary structure 








......











Query SS confidence 





























. . . . . .













Query Sequence  KGNVTFRLRSEVLSVAKDETGFTLDLNGMT. . . . . . VGCEKLVIATGGLS
Query Conservation       
     
  
               ......          
   
Alig confidence 





























......













Template Conservation    
  
     
  
               
     
 
  





  
Template Sequence  RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWV
Template Known Secondary structure  TT

STTTTT



GGG
Template Predicted Secondary structure 


















Template SS confidence 

















































   161........170.........180.........190.........200.........210
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions