Job Description P37631 Confidence 99.96% Date Thu Jan 5 11:56:04 GMT 2012 Rank 14 Aligned Residues 343 % Identity 20% Template c2e5vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-aspartate oxidase; PDBTitle: crystal structure of l-aspartate oxidase from2 hyperthermophilic archaeon sulfolobus tokodaii Resolution 2.09 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.								.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.
Query Sequence		A	I	I	I	G	A	G	A	A	G	M	F	C	S	A	L	A	G	Q	A	G	R	R	V	L	L	I	D	N	G	K	K	P	G	R	K	I	L	M	S	G	G	G	R	C	N	F	T	N	L	Y	V	E	P	G	A	Y	L	S	Q	N	.	.	.	.	.	.	.	P	H	F	C	K	S	A	L	A	R	F	T
Query Conservation																																																															.	.	.	.	.	.	.
Alig confidence																																		.																													.	.	.	.	.	.	.
Template Conservation																																		.
Template Sequence		I	Y	I	I	G	S	G	I	A	G	L	S	A	G	V	A	L	R	R	A	G	K	K	V	T	L	I	S	K	R	I	D	.	G	G	S	T	P	I	A	K	G	G	V	A	A	S	V	G	S	D	D	S	P	E	L	H	A	Q	D	T	I	R	V	G	D	G	L	C	D	V	K	T	V	N	Y	V	T	S	E
Template Known Secondary structure								S													T	T								S	S	T	T	.		S	S	G	G	G			S							S	T	T															T	T		S
Template Predicted Secondary structure																																		.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.										.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		Q	W	D	F	I	D	L	V	N	K	H	G	I	A	W	H	E	K	T	L	G	Q	L	F	C	D	D	S	A	Q	.	.	.	.	.	.	.	.	.	Q	I	V	D	M	L	V	D	E	C	E	K	G	N	V	T	F	R	L	R	S	E	V	L	S	V	A	K	D	E	T	.	.	G	F	T	L	D	L	N	G
Query Conservation																																.	.	.	.	.	.	.	.	.																																.	.
Alig confidence																																.	.	.	.	.	.	.	.	.																																.	.
Template Conservation
Template Sequence		A	K	N	V	I	E	T	F	E	S	W	G	F	E	F	E	E	D	L	R	L	E	G	G	H	T	K	R	R	V	L	H	R	T	D	E	T	G	R	E	I	F	N	F	L	L	K	L	A	R	E	E	G	I	P	I	I	E	D	R	L	V	E	I	R	V	K	D	G	K	V	T	G	F	V	T	E	K	R	G
Template Known Secondary structure												T	T					S	S		B			T	T		S	S						S	S	S																	T	T															T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																			.	.	.	.	.	.																																.
Query SS confidence																			.	.	.	.	.	.																																.
Query Sequence		M	T	V	G	C	E	K	L	V	I	A	T	G	G	L	S	M	.	.	.	.	.	.	P	G	L	G	A	S	P	F	G	Y	K	I	A	E	Q	F	G	L	N	V	L	P	T	R	A	G	L	V	P	F	T	.	L	H	K	P	L	L	E	E	L	Q	V	L	A	G	V	A	V	P	S	V	I	T	A	E	N
Query Conservation																			.	.	.	.	.	.																																.
Alig confidence																			.	.	.	.	.	.																																.
Template Conservation
Template Sequence		L	V	E	D	V	D	K	L	V	L	A	T	G	G	Y	S	Y	L	Y	E	Y	S	S	T	Q	S	T	N	I	G	D	G	M	A	I	A	F	K	A	G	T	I	L	A	D	M	E	F	V	Q	F	H	P	T	V	T	S	L	D	G	E	V	F	L	L	T	E	T	L	R	G	E	G	A	Q	I	I	N	E	N
Template Known Secondary structure							S										G	G	G	S	S	S	B	S	S		T	T		S										T	T						T	T											G	G	G							T					T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		G	T	V	F	R	E	N	L	L	F	T	H	R	G	L	S	G	P	A	V	L	Q	I	S	S	.	Y	W	Q	P	G	E	F	V	S	I	N	L	L	P	D	V	D	L	E	T	F	L	N	E	Q	R	N	A	H	P	N	Q	S	L	K	N	T	L	A	V	H	L	P	K	R	L	V	E	R	L	Q	Q	L	G
Query Conservation																											.
Alig confidence																											.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	R	F	L	F	N	Y	D	K	R	G	E	L	A	P	R	D	I	L	S	R	A	I	Y	I	E	M	L	K	G	H	K	V	F	I	D	L	S	K	I	E	D	F	E	R	K	F	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					G	G	G	G	T		T	T	G	G	G	S																T								T	T		T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.			.	.
Predicted Secondary structure																																																																								.	.					.	.
Query SS confidence																																																																								.	.					.	.
Query Sequence		Q	I	P	D	V	S	L	K	Q	L	N	V	R	D	Q	Q	A	L	I	S	T	L	T	D	W	R	V	Q	P	N	G	T	E	G	Y	R	T	A	E	V	T	L	G	G	V	D	T	N	E	L	S	S	R	T	M	E	A	R	K	V	P	G	L	Y	F	I	G	E	V	M	.	.	D	V	T	G	.	.	W	L
Query Conservation																																																																								.	.					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																					.	.	.	.	.																	.	.					.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																					.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	K	Y	L	A	R	H	G	H	N	Y	K	.	.	.	V	K	I	P	I	F	P	A	A	H	F	V	D	G	G	I	R	V	N	I	.	.	.	.	.	R	G	E	S	N	I	V	N	L	Y	A	I	G	E	V	S	D	S	G	L	H	G	A	N	R	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.								T	T			T	T	.	.	.	S												S							T	.	.	.	.	.	T		B		S	S	B	T					G	G	G				S	S	S	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																					.	.	.	.	.
Template SS confidence
															291	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.						.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	Y	N	F	Q	W	A	W	S	S	A	W	A	C	A	Q	D	L	I	A	A	K	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	N	S	L	L	E	G	L	V	F	G	I	N	L	P	R	Y	V	D	S	S	W	E	G
Template Known Secondary structure		T	T													G	G	G	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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