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Job DescriptionP37631
Confidence99.61%DateThu Jan 5 11:56:04 GMT 2012
Rank82Aligned Residues343
% Identity16%Templatec1zmcG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:dihydrolipoyl dehydrogenase; PDBTitle: crystal structure of human dihydrolipoamide dehydrogenase2 complexed to nad+
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  RFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDF
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Template Sequence  DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVG. . . . . . . . . . CIPSKALLNNSHYY. . . . HMAHGTDF
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   6...10.........20.........30.........40......... 50.........60... ......70.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  IDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDLNGMTVGCEKLVIATGGL
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Template Sequence  ASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSE
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   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  SMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFRENLLFTHRGLSGPAVLQ
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Template Sequence  VTPFPGITIDE. . . . . . . . DTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEIS
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   152.......160.. .......170.........180.........190.........200.........210.........220...
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  ISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLT
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Template Sequence  KNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKA. . . . . . . . . . . EVITCDVLLVCIGRRPFTKNLGLEEL
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   224.....230.........240.........250.........260...... ...270.........280.........290..
 
   323......330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  DWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQDLIAAKSS
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Template Sequence  GIELDPRG. . . . . . . . . . . . RIPVNT. . . . . RFQTKIPNIYAIGDVVAGPML. . . . . AHKAEDEGIICVEGMAGGAVH
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   293......300 ...... ...310.........320....... ..330.........340........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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