Job Description P37631 Confidence 100.00% Date Thu Jan 5 11:56:04 GMT 2012 Rank 4 Aligned Residues 389 % Identity 20% Template c1qo8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:flavocytochrome c3 fumarate reductase; PDBTitle: the structure of the open conformation of a flavocytochrome2 c3 fumarate reductase Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		E	R	F	D	A	I	I	I	G	A	G	A	A	G	M	F	C	S	A	L	A	G	Q	A	G	R	R	V	L	L	I	D	N	G	K	K	P	G	R	K	I	L	M	S	G	G	G	R	C	N	F	T	N	L	Y	V	E	P	G	A	Y	L	S	Q	N	P	H	F	C	K	S	A	L	A	R	F	T	Q	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		E	T	T	Q	V	L	V	V	G	A	G	S	A	G	F	N	A	S	L	A	A	K	K	A	G	A	N	V	I	L	V	D	K	A	P	F	S	G	G	N	S	M	I	S	A	G	G	M	N	A	V	G	T	K	Q	Q	T	A	H	G	V	E	D	K	V	E	W	F	I	E	D	A	M	K	G	G	R	Q	Q	N
Template Known Secondary structure												S														T								S	S	S	S	S		T	T	G	G	G			S					S	S							T	T																T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
														80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	W	D	F	I	D	L	V	N	K	H	G	I	A	W	H	E	K	T	L	G	.	.	.	.	.	.	.	.	.	.	Q	L	F	C	D	D	S	A	Q	Q	I	V	D	M	L	V	D	E	C	E	K	G	N	V	T	F	R	L	R	S	E	V	L	S	V	A	K	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	I	K	L	V	T	I	L	A	E	Q	S	A	D	G	V	Q	W	L	E	S	L	G	A	N	L	D	D	L	K	R	S	G	G	A	R	V	D	R	T	H	R	P	H	G	G	K	S	S	G	P	E	I	I	D	T	L	R	K	A	A	K	E	Q	G	I	D	T	R	L	N	S	R	V	V	K	L	V	V	N
Template Known Secondary structure																							T	T										T	T		S	S							S	S	S	S																	T	T						S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.	.	.	160	.																			.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure														.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	G	F	T	L	D	L	N	G	M	T	.	.	.	.	.	.	.	V	G	C	E	K	L	V	I	A	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	M	P	G	L	G	A	S	P	F	G	Y	K	I	A	E	Q	F	G	L	N	V	L	P	T	R	A	G	L	V
Query Conservation														.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	H	S	V	V	G	A	V	V	H	G	K	H	T	G	Y	Y	M	I	G	A	K	S	V	V	L	A	T	G	G	Y	G	M	N	K	E	M	I	A	Y	Y	R	P	T	M	K	D	M	T	S	S	N	N	I	T	A	T	G	D	G	V	L	M	A	K	E	I	G	A	S	M	T	D	I	D	W	V	Q	A
Template Known Secondary structure		T	T	S	B									T	T	T																		T	T										G	G	G	T	T					S		T	T		S										T	T	B				S	T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	T	L	H	K	P	L	L	E	E	L	Q	V	L	A	G	V	A	V	P	S	V	I	T	A	E	N	G	T	V	F	R	E	N	L	L	F	T	H	R	G	L	S	G	P	A	V	L	Q	I	S	S	Y	W	Q	P	G	E	F	V	S	I	N	L	L	P	D	V	D	L	E	T	F	L	N	E	Q	R	N
Query Conservation
Alig confidence								.																																		.	.	.
Template Conservation								.																																		.	.	.
Template Sequence		H	P	T	V	G	K	.	D	S	R	I	L	I	S	E	T	V	R	G	V	G	A	V	M	V	N	K	D	G	N	R	F	I	S	E	L	T	T	R	D	.	.	.	K	A	S	D	A	I	L	K	Q	P	G	Q	F	A	W	I	I	F	D	N	Q	L	Y	K	K	A	K	M	V	R	G	Y	D	H	L	E	M
Template Known Secondary structure							S	.	S	S		S	B			T					T	T						T	T	S				S		T	T	S				.	.	.								T	S	G	G	G																							T	T
Template Predicted Secondary structure								.																																		.	.	.
Template SS confidence
		360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.				.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		A	H	P	N	Q	S	L	K	N	T	L	A	V	H	L	P	K	R	L	V	E	R	L	Q	Q	L	G	Q	I	P	D	V	S	L	K	Q	L	N	V	R	D	Q	Q	A	L	I	S	T	L	T	D	W	R	V	Q	P	N	G	T	E	G	Y	R	T	A	E	V	T	L	G	G	V	D	T	N	E	.	L	S	S
Query Conservation																																																																														.
Alig confidence																			.	.																																																										.
Template Conservation																			.	.
Template Sequence		L	Y	K	G	D	T	V	E	Q	L	A	K	S	T	G	M	K	.	.	V	A	D	L	A	K	T	V	S	D	Y	N	G	Y	V	A	S	G	K	D	T	A	F	G	R	A	D	M	P	L	N	M	T	Q	S	P	Y	Y	A	V	K	V	A	P	G	I	H	H	T	M	G	G	V	A	I	N	T	T	A	S	V
Template Known Secondary structure						S	S								T	T			.	.																		S			T	T	T			S						S		S	S	S																			B		T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.			.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure																				.							.	.
Query SS confidence																				.							.	.
Query Sequence		R	T	M	E	A	R	K	V	P	G	L	Y	F	I	G	E	V	M	.	D	V	T	G	W	L	.	.	G	G	Y	N	F	Q	W	A	W	S	S	A	W	A	C	A	Q	D	L	I	A
Query Conservation																				.							.	.
Alig confidence																				.							.	.
Template Conservation
Template Sequence		L	D	L	Q	S	K	P	I	D	G	L	F	A	A	G	E	V	T	G	G	V	H	G	Y	N	R	L	G	G	N	A	I	A	D	T	V	V	F	G	R	I	A	G	D	N	A	A	K
Template Known Secondary structure			B	T	T	S										S	T	T	B		S	S	S	T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		514	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.