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Job DescriptionP37631
Confidence99.68%DateThu Jan 5 11:56:04 GMT 2012
Rank63Aligned Residues218
% Identity29%Templatec1onfA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glutathione reductase; PDBTitle: crystal structure of plasmodium falciparum glutathione reductase
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70........
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Query Sequence  FDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILMSGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFT. . . . .
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Template Sequence  YDLIVIGGGSGGMAAARRAARHNAKVALVEKSRLGGTCV. . . . . . . . . . . NVGCVPKKIMFNAASVHDILENSRHYGFDT
Template Known Secondary structure  BS

STT

SSSTT...........TSGGGGT


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   2.......10.........20.........30.........40 .........50.........60.........70
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation  ................................................................................
Template Conservation                                                                                  
Template Sequence  KFSFNLPLLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLEGRNILIAVGNKPVFPPVKGIENTISSDEFFNIKESK
Template Known Secondary structure 




TT
S





BSS




B


S
TTGGG
TT



S
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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   7980.........90.........100.........110.........120.........130.........140.....
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Query Sequence  . . . . . . . . . . QWDFIDLVNKHGIAWHEKTLGQLFCDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLDL. . .
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Template Conservation         
                                             

 
     
  
              
Template Sequence  KIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSD
Template Known Secondary structure 

STTT

SSSSS
TTS
TT

S

SSTT
TT
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   177..180.........190.........200.........210.........220.........230.........240.........250......
 
   146...150.........160.........170.........180.........190.........200.........210.........220.....
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Query Sequence  NGMTVGCEKLVIATGGLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITAENGTVFR
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Template Sequence  GRIYEHFDHVIYCVGRSPDTENLKL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S
S


B

TTTTSS
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   257..260.........270.........280.
 
   226...230.........240.........250.........260.........270.........280.........290.........300.....
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Query Sequence  ENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPNQSLKNTLAVHLPKRLVERLQQLGQIPDVS
Query Conservation                                                                                  
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   306...310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  LKQLNVRDQQALISTLTDWRVQPNGTEGYRTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . EKLNVETNNNYIVVDE. . . . . NQRTSVNNIYAVGDCCMVKFYNVQ. LTPVAIN
Template Known Secondary structure  ...........................TTTT

BSSS

T.....T
B
SSSS
STT

B


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   282.......290....... ..300.........310.........320. .......
 
   386...390.........400
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Query Sequence  SAWACAQDLIAAKSS
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Template Sequence  AGRLLADRLFLKKTR
Template Known Secondary structure  S
TT
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   359360.........370...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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