Job Description P37631 Confidence 99.65% Date Thu Jan 5 11:56:04 GMT 2012 Rank 70 Aligned Residues 340 % Identity 18% Template c1dxlC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:dihydrolipoamide dehydrogenase; PDBTitle: dihydrolipoamide dehydrogenase of glycine decarboxylase2 from pisum sativum Resolution 3.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	F	D	A	I	I	I	G	A	G	A	A	G	M	F	C	S	A	L	A	G	Q	A	G	R	R	V	L	L	I	D	N	G	K	K	P	G	R	K	I	L	M	S	G	G	G	R	C	N	F	T	N	L	Y	V	E	P	G	A	Y	L	S	Q	N	P	H	F	C	K	S	A	L	A	R	F	T	Q	W	D
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		D	E	N	D	V	V	I	I	G	G	G	P	G	G	Y	V	A	A	I	K	A	A	Q	L	G	F	K	T	T	C	I	E	K	R	G	A	L	G	G	T	C	L	N	V	G	.	.	.	.	.	.	.	.	.	.	C	I	P	S	K	A	L	L	H	S	S	H	M	Y	H	E	A	K	H	.	.	.	.	.	S
Template Known Secondary structure			B		S							S														T									S	S	S	S	S							S	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.											50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.						.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	D	L	V	N	K	H	G	I	A	W	H	E	K	T	L	G	Q	L	F	C	D	D	S	A	Q	Q	I	V	D	M	L	V	D	E	C	E	K	G	N	V	T	F	R	L	R	S	E	V	L	S	V	A	K	D	E	T	G	F	T	L	D	L	N	G	M	T	V	G	C	E	K	L	V	I	A	T	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	N	H	G	V	K	V	S	N	V	E	I	D	L	A	A	M	M	G	Q	K	D	K	A	V	S	N	L	T	R	G	I	E	G	L	F	K	K	N	K	V	T	Y	V	K	G	Y	G	K	F	V	S	P	S	E	I	S	V	D	T	I	E	G	E	N	T	V	V	K	G	K	H	I	I	I	A	T	G	S
Template Known Secondary structure										S																																T						S					S	S	S	S						B	T	T	T	B							S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	M	P	G	L	G	A	S	P	F	G	Y	K	I	A	E	Q	F	G	L	N	V	L	P	T	R	A	G	L	V	P	F	T	L	H	K	P	L	L	E	E	L	Q	V	L	A	G	V	A	V	P	S	V	I	T	A	E	N	G	T	V	F	R	E	N	L	L	F	T	H	R	G	L	S	G	P	A	V	L
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.
Template Sequence		D	V	K	S	L	P	G	V	T	I	D	E	K	K	.	.	.	.	.	.	.	.	I	V	S	S	T	G	A	L	A	L	S	E	I	P	K	K	L	V	V	I	G	A	G	Y	I	G	L	E	M	G	S	V	W	G	R	I	G	S	E	V	T	V	V	E	F	A	S	E	I	V	P	T	M	D	A	E	I	R
Template Known Secondary structure							S	S	S				T	T	S	.	.	.	.	.	.	.	.									T		S	S			S					S	S		S														T								S	S	S	S	S	S	S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	S	S	Y	W	Q	P	G	E	F	V	S	I	N	L	L	P	D	V	D	L	E	T	F	L	N	E	Q	R	N	A	H	P	N	Q	S	L	K	N	T	L	A	V	H	L	P	K	R	L	V	E	R	L	Q	Q	L	G	Q	I	P	D	V	S	L	K	Q	L	N	V	R	D	Q	Q	A	L	I	S	T	L
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Q	F	Q	R	S	L	E	K	Q	G	M	K	F	K	L	K	T	K	V	V	G	V	D	T	S	G	D	G	V	K	L	T	V	E	P	S	A	G	G	E	Q	T	I	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	A	D	V	V	L	V	S	A	G	R	T	P	F	T	S	G	L	N	L	D	K
Template Known Secondary structure										T	T	S					T	T							B		S	S	S	S		B			B			S	S	S	S			B		.	.	.	.	.	.	.	.	.	.	.	.	.				S													T	T				T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.														.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	W	R	V	Q	P	N	G	T	E	G	Y	R	T	A	E	V	T	L	G	G	V	D	T	N	E	L	S	S	R	T	M	E	A	R	K	V	P	G	L	Y	F	I	G	E	V	M	D	V	T	G	W	L	G	G	Y	N	F	Q	W	A	W	S	S	A	W	A	C	A	Q	D	L	I	A	A	K	S
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.				.																			.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.				.																			.	.	.	.	.
Template Sequence		I	G	V	E	T	D	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	R	I	L	V	N	E	.	.	.	.	R	F	S	.	T	N	V	S	G	V	Y	A	I	G	D	V	I	P	G	P	M	L	.	.	.	.	.	A	H	K	A	E	E	D	G	V	A	C	V	E	Y	L	A	G	K	V	G
Template Known Secondary structure		T						T	T	S	.	.	.	.	.	.	.	.	.	.	.	.						T	.	.	.	.	T	S	B	.		S	S	T	T					S	T	T	S	S	S				.	.	.	.	.																	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.				.																			.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.													.	.	300	.	.	.					.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.						.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions