Job Description P71237 Confidence 98.98% Date Thu Jan 5 12:12:28 GMT 2012 Rank 48 Aligned Residues 384 % Identity 11% Template d2vcha1 SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like Resolution 1.45

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																												.																																													.	.	.	.	.	.	.	.	.
Query SS confidence																												.																																													.	.	.	.	.	.	.	.	.
Query Sequence		I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	L	D	L	H	Q	R	A	L	Q	.	Q	G	L	A	S	H	F	V	Y	G	Y	G	K	G	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T	A	M	A	N	I	A	L	F	R	.	.	.	.	.	.	.	.	.
Query Conservation																												.																																													.	.	.	.	.	.	.	.	.
Alig confidence								.	.																			.																																													.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		V	A	I	I	P	S	.	.	P	G	M	G	H	L	I	P	L	V	E	F	A	K	R	L	V	H	L	H	G	L	T	V	T	F	V	I	A	G	E	G	P	P	S	A	Q	R	T	V	L	D	L	P	S	S	I	S	S	V	F	L	P	P	V	D	L	T	D	L	S	S	S	T	R	I	E	S	R	I	S	L
Template Known Secondary structure								.	.	S																														S	S	S												T	T												T	T	S		T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		9	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																		.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	F	N	R	D	L	F	G	N	F	N	E	L	Y	R	T	I	T	R	T	A	G	P	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S	V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	T	R	S	N	P	E	L	R	K	V	F	D	S	F	V	E	G	G	R	L	P	T	A	L	V	V	D	.	.	.	.	.	.	.	.	.	.	.	L	F	G	T	D	A	F	D	V	A	V	E	F	H	V	P	P	Y	I	F	Y	P	T	T	A	N	V	L	S	F	F	L	H	L	P	K	L	D	E	T
Template Known Secondary structure					T	T														T	T				S						.	.	.	.	.	.	.	.	.	.	.	T	T		G	G	G							T	T									S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	W	S	V	T	G	R	C	A	F	T	D	G	C	E	G	W	K	T	G	C	Q	K	C	P	T	L	N	N	Y	P	P	V	K	I	D	R	A	H	Q	L	V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	L	Y	G	P	G	R	C	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	C	E	F	R	E	L	T	E	P	L	M	L	P	G	C	V	P	V	A	G	K	D	F	L	D	P	A	Q	D	R	K	D	D	A	Y	K	W	L	L	H	N	T	K	R	Y	K	E	A	E	G	I	L	V	N	T	F	F	E	L	E	P	N	A	I	K	A	L	Q	E	P	G	L	D	K	P	P	V	Y
Template Known Secondary structure				S		G	G	G		S	S		B			T	T				B		G	G	G	S		G	G	G	S		T	T	S													G	G	G		S					S			T	T	T	S									S			T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	I	N	N	G	I	D	M	A	T	E	A	I	L	A	D	L	P	P	V	R	E	T	Q	G	K	P	K	I	A	V	V	A	H	D	L	R	Y	D	G	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	F	T	A	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	G	P	L	V	N	I	G	K	Q	E	A	S	E	C	L	K	W	L	D	N	Q	P	L	G	S	V	L	Y	V	S	F	G	S	G	G	T	L	T	C	E	Q	L	N	E	L	A	L	G	L	A	D	S	E	Q	R	F	L	W	V	I	R	S	P	S	G	I	A	N	S	S	Y	F	D	S	Q	T	D	P
Template Known Secondary structure										S		S											T	S		T	T								T	T	T																		T	T												S	S	T	T	T	T	T	T				S		G
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
															286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340						.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A	L	N	Q	M	D	A	L	V	F	S	S	R	V	D	N	Y	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	.	.	.	.	.	A	R	E	V	L	Q	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.									.	.	.	.																										.	.	.	.	.
Template Conservation																																.									.	.	.	.
Template Sequence		L	T	F	L	P	P	G	F	L	E	R	T	K	K	R	G	F	V	I	P	F	W	A	P	Q	A	Q	V	L	A	.	H	P	S	T	G	G	F	L	.	.	.	.	T	H	C	G	W	N	S	T	L	E	S	V	V	S	G	I	P	L	I	A	W	P	L	Y	A	E	Q	K	M	N	A	V	L	L	S	E	D
Template Known Secondary structure		G	G	G	S		T	T					T	T	T	T						S										.	S	T	T						.	.	.	.															T									S	T	T											T
Template Predicted Secondary structure																																.									.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.					.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
			348	.	350	.	.	.	.	.	.	.						.	.	360	.	.	.	.	.	.	.	.	.	370	.	.							.	.	.	.	.	.	.	380	.	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure		.											.	.	.	.	.																.	.	.	.	.	.													.
Query SS confidence		.											.	.	.	.	.																.	.	.	.	.	.													.
Query Sequence		.	S	G	G	K	T	V	S	E	E	E	.	.	.	.	.	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	.	.	.	.	.	.	I	F	G	T	T	L	A	E	F	S	Q	R	.	S	R	A	A	Y	S	G	Q	Q	M	L	E	E	Y	V	N	F	Y	Q	N
Query Conservation		.											.	.	.	.	.																.	.	.	.	.	.													.
Alig confidence		.											.	.	.	.	.																.	.	.	.	.	.													.
Template Conservation
Template Sequence		I	R	A	A	L	R	P	R	A	G	D	D	G	L	V	R	R	E	E	V	A	R	V	V	K	G	L	M	E	G	E	E	G	K	G	V	R	N	K	M	K	E	L	K	E	A	A	C	R	V	L	K	D	D	G	T	S	T	K	A	L	S	L	V	A	L	K	W	K	A
Template Known Secondary structure		T										T	T	S																T	S	T																				T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.