Return to main results Retrieve Phyre Job Id

Job DescriptionP71237
Confidence99.07%DateThu Jan 5 12:12:28 GMT 2012
Rank47Aligned Residues382
% Identity7%Templated2pq6a1
SCOP infoUDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDPGT-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  ILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNF
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Template Sequence  VVMI. . PYPVQGHINPLFKLAKLLHLRGFHITFVN. . . TEYNHKRLLDFNFESIPDGLTQDVPTLCQSVRKNFLKPYCEL
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SSTT
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   11... .....20.........30.........40... ......50.........60.........70.........80.....
 
   83......90.........100.........110.........120.........130..... ....
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Query Sequence  NELYRTITRTAGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHD. . . . . . . . . . . . . . . . . . . . . . . HWSV
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Template Sequence  LTRLNHSTNVPPVTCLVSD. . . . . . . . . . . CCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPFKDESY
Template Known Secondary structure  T
SSS



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TTT


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SSGGG
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   107..110.........120..... ....130.........140.........150.........160.........170.....
 
   140.........150.........160.........170.........180.........190.........200.........210.........
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Query Sequence  TGRCAFTDGCEGWKTGCQKCPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINN
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Template Sequence  LTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTIPSIYPI
Template Known Secondary structure  GTSSGGG
B

SSTT

S
BGGGS
GGG

S
TT
T

TT

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GGGGTT
TT
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   176...180.........190.........200.........210.........220.........230.........240.........250.....
 
   220.........230..... ....240.........250.........260.........270.........280....
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Query Sequence  GIDMATEAILADLPPV. . . . . . . . . . RETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSPFT. . . . .
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Template Conservation                      
            
    

              

       
               
Template Sequence  GPLPSLLKQTPQIHQLDSTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFS
Template Known Secondary structure 

TSTTGGGG


TTS
TT


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TT


GGGSTTTGGGS
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   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   285....290.........300.........310.........320.........330.........340 ....... ..350..
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Query Sequence  . . . . . . AGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDA. . . . . AREVLQK. SGGKT
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Template Sequence  SEFTNEIADRGLIASWCPQDK. VLNHPSIGGFL. . . . THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGME
Template Known Secondary structure  TTTS


.TSTT....


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   345....350.........360..... ....370...... ...380.........390.........400.........410.........
 
   353... ...360.........370... ......380.........390.. .......400.....
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Query Sequence  VSEE. EVLQLVQLSKPEIAQAI. . . FGTTLAEFSQRSRAAYSGQ. QMLEEYVNFYQNL
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Template Sequence  IDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDV
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SS

TSTSTT
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   420.........430.........440.........450.........460.........470.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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