Job Description P71237 Confidence 99.68% Date Thu Jan 5 12:12:28 GMT 2012 Rank 41 Aligned Residues 376 % Identity 7% Template d1pn3a_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Gtf glycosyltransferase Resolution 2.80

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	L	D	L	H	Q	R	A	L	Q	Q	G	L	A	S	H	F	V	Y	G	Y	G	K	G	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T	A	M	A	N	I	A	L	F	R	L	F	N	R	D	L	F	G
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		M	R	V	L	I	T	G	.	.	C	G	S	R	G	D	T	E	P	L	V	A	L	A	A	R	L	R	E	L	G	A	D	A	R	M	C	L	P	P	D	Y	V	E	R	C	A	E	V	G	V	P	M	V	P	V	G	R	A	V	R	A	G	A	R	E	P	G	E	L	P	P	G	A	A	E	V	V	T	E	V
Template Known Secondary structure									.	.		S	S																	T	T									G	G	G								T							S	S		S	S	G	G	G	S		T	T				T	T		G	G	G
Template Predicted Secondary structure									.	.
Template SS confidence
		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	N	E	L	Y	R	T	I	T	R	T	A	G	P	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S	V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T	L	H	D	H	W	S	V	T	G	R	C	A	F	T	D	G	C	E	G	W	K	T	G	C	Q	K	C	P
Query Conservation
Alig confidence																								.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.
Template Sequence		V	A	E	W	F	D	K	V	P	A	A	I	E	G	C	D	A	V	V	T	T	G	.	.	.	.	.	.	.	L	L	P	A	A	V	A	V	R	S	M	A	E	K	L	G	I	P	Y	R	Y	T	V	L	S	P	D	H	L	P	S	E	Q	S	Q	A	E	R	D	M	Y	N	Q	G	A	D	R	L	F	G	D
Template Known Secondary structure														T	T		S							.	.	.	.	.	.	.																T								S	S	G	G	G	S	G	G	G	S																T
Template Predicted Secondary structure																								.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	N	N	Y	P	P	V	K	I	D	R	A	H	Q	L	V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	L	Y	G	P	G	R	C	R	I	I	N	N	G	I	D	M	A	T	E	A	I	L	A	D	L	P	P	V	R	E	T	Q	G
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		A	V	N	S	H	R	A	S	I	G	L	P	P	V	E	H	L	Y	D	Y	G	Y	T	D	Q	P	W	L	A	A	D	P	V	L	S	P	L	R	P	.	.	.	.	.	.	.	.	.	T	D	L	G	T	V	Q	T	G	A	W	I	L	P	D	E	R	P	L	S	A	E	L	E	A	F	L	A	A	G	S	T
Template Known Secondary structure									T	T	S														S	S					S		T	T	T	S				T	.	.	.	.	.	.	.	.	.	T			S			B																				T	T	S	S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190										.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	K	I	A	V	V	A	H	D	L	R	Y	D	G	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	F	T	A	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A	L	N	Q	M	D	A	L	V	F	S	S	R	V	D	N	Y	P
Query Conservation
Alig confidence																																	.	.																																							.	.	.	.
Template Conservation																																	.	.																																							.	.	.	.
Template Sequence		P	V	Y	V	G	F	G	S	S	S	R	P	A	T	A	D	A	A	K	M	A	I	K	A	V	R	A	S	G	R	R	.	.	I	V	L	S	R	G	W	A	D	L	V	L	P	D	D	G	A	D	C	F	V	V	G	E	V	N	L	Q	E	L	F	G	R	V	A	A	A	I	.	.	.	.	H	H	D	S	A
Template Known Secondary structure								T	T			S	T																T	T			.	.						T	T	T	T				S	S			T	T					S	S								T	T	S	S				.	.	.	.			S
Template Predicted Secondary structure																																	.	.																																							.	.	.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.					.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340									.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.								.											.	.
Query SS confidence																						.	.	.	.	.	.	.	.								.											.	.
Query Sequence		L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	.	.	.	.	.	.	.	.	A	R	E	V	L	Q	K	.	S	G	G	K	T	V	S	E	E	E	.	.	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L	A	E	F	S	Q	R	S	R	A	A	Y
Query Conservation																						.	.	.	.	.	.	.	.								.											.	.
Alig confidence																						.	.	.	.	.	.	.	.								.											.	.																.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.
Template Sequence		G	T	T	L	L	A	M	R	A	G	I	P	Q	I	V	V	R	R	V	V	D	N	V	V	E	Q	A	Y	H	A	D	R	V	A	E	L	G	V	G	V	A	V	D	G	P	V	P	T	I	D	S	L	S	A	A	L	D	T	A	L	A	P	E	.	.	.	.	.	I	R	A	R	A	T	T	V	A	D	T	I
Template Known Secondary structure											T								S	S			B	T	T	B												T	S							S	S														T	S	T	T	.	.	.	.	.									G	G	G	S
Template Predicted Secondary structure																																																																	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.						360	.	.	.	.	.	.	.	.	.	370	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Q	Q	M	L	E	E	Y	V	N	F	Y	Q	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	D	G	T	T	V	A	A	Q	L	L	F	D	A	V
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions