Return to main results Retrieve Phyre Job Id

Job DescriptionP71237
Confidence95.22%DateThu Jan 5 12:12:28 GMT 2012
Rank59Aligned Residues162
% Identity17%Templated1l5wa_
SCOP infoUDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Oligosaccharide phosphorylase
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   239240.........250.........260 ........ .270 .........280.......
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Query Sequence  QGKPKIAVVAHDLRYDGKTNQQ. LVREMMAL. . . . . . . GD. . . KIELHTFGKFSPFTAGN. . . . . . . . . . . . . . . . . . . .
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Template Sequence  INPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLV
Template Known Secondary structure 

TTSS


GGGTT
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   522.......530.........540.........550.........560.........570.........580.........590.........600.
 
   288.290.........300.........310...... ...320.........330.........340....... ..350....
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Query Sequence  . . . . VVNHGFETDKRKLMSALNQMDALVFSSRV. . DNYPLILCEALSIGVPVIATHSDAAREVLQK. . . SGGKTVS. . . .
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Template Sequence  GDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
Template Known Secondary structure  GGG
SS

GGG
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STT

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   602.......610.........620.........630.........640.........650.........660.........670.........680.
 
   355....360.........370. .
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EEEVLQLVQLSKPEIAQ. . . . . . . . . . . . . . . . . . . . . . . . A
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Template Sequence  QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYLVMADFAAYVEAQKQVDVLYRDQ
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TTTTTT
TTTTTSTTT

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   682.......690.........700.........710.........720.........730.........740.........750.........760.
 
   373......380.........390.........400
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Query Sequence  IFGTTLAEFSQRSRAAYSGQQMLEEYVN
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Template Sequence  EAWTRAAILNTARCGMFSSDRSIRDYQA
Template Known Secondary structure 
GGGB
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   762.......770.........780.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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