Job Description P71237 Confidence 99.91% Date Thu Jan 5 12:12:28 GMT 2012 Rank 29 Aligned Residues 330 % Identity 13% Template d1f0ka_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase Peptidoglycan biosynthesis glycosyltransferase MurG Resolution 1.90

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	L	D	L	H	Q	R	A	L	Q	Q	G	L	A	S	H	F	V	Y	G	Y	G	K	G	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T	A	M	A	N	I	A	L	F	R	L	F	N	R	D	L	F	G	N
Query Conservation
Alig confidence								.	.																																											.	.
Template Conservation								.	.																																											.	.
Template Sequence		R	L	M	V	M	A	.	.	G	G	T	G	G	H	V	F	P	G	L	A	V	A	H	H	L	M	A	Q	G	W	Q	V	R	W	L	G	T	A	D	R	M	E	A	D	L	V	P	K	H	G	.	.	I	E	I	D	F	I	R	I	S	G	L	R	G	K	G	I	K	A	L	I	A	A	P	L	R	I	F	N
Template Known Secondary structure								.	.		S	S																T	T	T									T	T	S	T					G	G	G	G	T	.	.												T	T								T
Template Predicted Secondary structure								.	.																																											.	.
Template SS confidence
		8	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	E	L	Y	R	T	I	T	R	T	A	G	P	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S	V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T	L	H	D	H	W	S	V	T	G	R	C	A	F	T	D	G	C	E	G	W	K	T	G	C	Q	K	C	P	T
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	W	R	Q	A	R	A	I	M	K	A	Y	K	P	D	V	V	L	G	M	G	G	Y	V	.	.	.	.	.	.	.	.	.	S	G	P	G	G	L	A	A	W	S	L	G	I	P	V	V	L	H	E	Q	N	G	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																S						S	S	T	T	.	.	.	.	.	.	.	.	.											T	T									S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.										.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	N	Y	P	P	V	K	I	D	R	A	H	Q	L	V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	L	Y	G	P	G	R	C	R	I	I	N	N	G	I	D	M	A	T	E	A	I	L	A	D	L	P	P	V	R	E	T	Q	G	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	N	K	W	L	A	K	I	A	T	K	V	M	Q	A	F	P	.	.	.	.	.	.	.	.	.	G	A	F	P	N	A	E	V	V	G	N	P	V	R	T	D	V	L	A	L	P	L	P	Q	Q	R	L	A	G	R	E	G	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T		S					S	S	T	.	.	.	.	.	.	.	.	.	T	S	S	S	S														T	S								T	T			S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
																					132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.											.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	I	A	V	V	A	H	D	L	R	Y	D	G	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	.	.	.	.	.	.	.	.	.	.	F	T	A	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A	L	N	Q	M	D	A	L	V
Query Conservation																																											.	.	.	.	.	.	.	.	.	.
Alig confidence											.																																.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation											.																																																																					.	.
Template Sequence		V	R	V	L	V	V	G	G	S	.	Q	G	A	R	I	L	N	Q	T	M	P	Q	V	A	A	K	L	G	D	S	V	T	I	W	H	Q	S	G	K	G	S	Q	Q	S	V	E	Q	A	Y	A	E	A	G	Q	P	Q	H	K	V	T	E	F	I	D	D	M	A	A	A	Y	A	W	A	D	V	V	V	C	.	.
Template Known Secondary structure									T	T	.	T																	G	G	G									T	T												T	T		T	T	S				S			S										S					.	.
Template Predicted Secondary structure											.																																																																					.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.		.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																	.	.	.	.	.	.	.							.									.	.
Query SS confidence																																	.	.	.	.	.	.	.							.									.	.
Query Sequence		F	S	S	R	V	D	N	Y	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	A	R	.	.	.	.	.	.	.	E	V	L	Q	K	S	.	G	G	K	T	V	S	E	E	.	.	E	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L	A	E	F
Query Conservation																																	.	.	.	.	.	.	.							.									.	.
Alig confidence		.	.	.	.	.																											.	.	.	.	.	.	.							.									.	.													.	.
Template Conservation		.	.	.	.	.																																																															.	.
Template Sequence		.	.	.	.	.	R	S	G	A	L	T	V	S	E	I	A	A	A	G	L	P	A	L	F	V	P	F	Q	H	K	D	R	Q	Q	Y	W	N	A	L	P	L	E	K	A	G	A	A	K	I	I	E	Q	P	Q	L	S	V	D	A	V	A	N	T	L	A	G	W	.	.	S	R	E	T	L	L	T	M	A	E	R
Template Known Secondary structure		.	.	.	.	.														T											T	T													T	T	S						G	G	G												T		.	.
Template Predicted Secondary structure		.	.	.	.	.																																																															.	.
Template SS confidence
							261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	R	S	R	A	A	Y	S	G	Q	Q	M	L	E	E	Y	V	N	F	Y	Q	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	A	A	S	I	P	D	A	T	E	R	V	A	N	E	V	S	R	V	A	R	A	L
Template Known Secondary structure					T			T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions