Job Description P71237 Confidence 99.96% Date Thu Jan 5 12:12:28 GMT 2012 Rank 21 Aligned Residues 305 % Identity 14% Template c3rhzB_ PDB info PDB header:transferase Chain: B: PDB Molecule:nucleotide sugar synthetase-like protein; PDBTitle: structure and functional analysis of a new subfamily of2 glycosyltransferases required for glycosylation of serine-rich3 streptococcal adhesions Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		M	N	I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	.	.	.	L	D	L	H	Q	R	A	L	Q	Q	G	L	A	S	H	F	V	Y	G	Y	G	K	G	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T	A	M	A	N	I	A	L	F	R	L	F	N	R	D
Query Conservation																					.	.	.
Alig confidence					.																.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	V	.	Y	I	T	N	I	N	G	Q	S	I	Q	S	T	A	Q	L	C	Q	N	T	V	T	D	V	A	V	S	L	G	Y	R	E	L	G	I	Y	C	Y	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	T	D
Template Known Secondary structure					.							S	S		T	T																	T	T											G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S
Template Predicted Secondary structure					.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																																		.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		L	F	G	N	F	N	E	L	Y	R	T	I	T	R	T	A	G	P	.	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S	V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T	L	H	D	H	W	S	V	T	G	R	C	A	F	T	D	G	C	E	G	W	K	T	G	C
Query Conservation																				.
Alig confidence																				.											.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	S	E	L	S	K	R	L	D	G	I	V	A	G	L	R	H	G	D	V	V	I	F	Q	T	P	T	W	.	.	.	.	N	T	T	E	F	D	E	K	L	M	N	K	L	K	L	Y	D	I	K	I	V	L	F	I	H	D	V	V	P	L	M	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T	T			T	T										S	.	.	.	.	S													T	T	S	S								S			G	G	G			G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	C	P	T	L	N	N	Y	P	P	V	K	I	D	R	A	H	Q	L	V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	L	Y	G	P	G	R	C	R	I	I	N	N	G	I	D	M	A	T	E	A	I	L	A	D	L	P	P	V	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	M	D	R	T	I	A	Y	Y	N	K	A	D	V	V	V	A	P	S	Q	K	M	I	D	K	L	R	D	F	G	M	N	V	S	K	T	V	V	Q	G	M	W	D	H	P	T	Q	A	P	M	F	P	A	L	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G									T	T		S					S											T	T				S							S														.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.	.
Template SS confidence
																								112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		E	T	Q	G	K	P	K	I	A	V	V	A	H	D	L	R	Y	D	G	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	F	T	A	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A	L	N	Q	M	D	A	L	V	F	S	S	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.	.	.	.	.																				.	.	.	.	.	.	.																	.																														.	.
Template Conservation		.	.	.	.	.	.																				.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	K	R	E	I	H	F	P	G	N	P	E	R	F	S	F	V	K	E	W	.	.	.	.	.	.	.	K	Y	D	I	P	L	K	V	Y	T	W	Q	N	V	E	L	.	P	Q	N	V	H	K	I	N	Y	R	P	D	E	Q	L	L	M	E	M	S	Q	G	G	F	G	L	V	W	M	D	D
Template Known Secondary structure		.	.	.	.	.	.								S		T	T	T		G	G	G	G	G		.	.	.	.	.	.	.			S	S							S						.		T	T																	T	T	S	S								G
Template Predicted Secondary structure		.	.	.	.	.	.																				.	.	.	.	.	.	.																	.
Template SS confidence
								168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
							315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																			.
Query SS confidence		.	.	.	.	.																																			.
Query Sequence		.	.	.	.	.	R	V	D	N	Y	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	A	R	E	V	L	Q	K	S	.	G	G	K	T	V	S	E	E	E	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L	A	E	F	S	Q	R	S	R	A	A
Query Conservation		.	.	.	.	.																																			.
Alig confidence		.	.	.	.	.																																			.							.	.													.	.
Template Conservation																																																.	.													.	.
Template Sequence		K	D	K	E	Y	Q	S	L	Y	C	S	Y	K	L	G	S	F	L	A	A	G	I	P	V	I	V	Q	E	G	I	A	N	Q	E	L	I	E	N	N	G	L	G	W	I	V	K	.	.	D	V	E	E	A	I	M	K	V	K	N	V	.	.	N	E	D	E	Y	I	E	L	V	K	N	V	R	S	F	N	P	I
Template Known Secondary structure		G	G					T	T	S												T							T	T		T	T							T	T						S	.	.	S												.	.																T
Template Predicted Secondary structure																																																.	.													.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	G	Q	Q	M	L	E	E	Y	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	K	G	F	F	T	R	R	L	L	T
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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