Job Description P71237 Confidence 98.14% Date Thu Jan 5 12:12:28 GMT 2012 Rank 50 Aligned Residues 194 % Identity 7% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

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		211	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure										.																																						.																															.	.	.
Query SS confidence										.																																						.																															.	.	.
Query Sequence		P	G	R	C	R	I	I	N	.	N	G	I	D	M	A	T	E	A	I	L	A	D	L	P	P	V	R	E	T	Q	G	K	P	K	I	A	V	V	A	H	D	L	R	Y	D	G	.	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	F	T	A	.	.	.
Query Conservation										.																																						.																															.	.	.
Alig confidence										.																																						.																															.	.	.
Template Conservation
Template Sequence		S	E	T	L	L	R	L	P	K	D	A	L	P	Y	V	P	S	A	L	A	P	E	K	V	D	Y	L	L	R	E	N	P	E	V	V	N	I	G	I	A	S	T	T	M	K	L	N	P	Y	F	L	E	A	L	K	A	I	R	D	R	A	K	V	K	V	H	F	H	F	A	L	G	Q	S	N	G	I	T	H	P
Template Known Secondary structure		S	S							T	T	S	S						T	T			S	S							S			S										S	T	T																	S	S										T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
												286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.					.	350	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																																.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																																																																.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A	L	N	Q	M	D	A	L	V	F	S	S	R	V	D	N	Y	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	A	R	E	V	L	Q	K	S	.	.	.	.	G	G	K
Query Conservation		.	.	.	.	.	.	.	.	.	.																																																																.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																	.																															.	.	.	.
Template Conservation																																												.
Template Sequence		Y	V	E	R	F	I	K	S	Y	L	G	D	S	A	T	A	H	P	H	S	P	Y	H	Q	Y	L	R	I	L	H	N	C	D	M	M	V	N	P	F	P	F	G	.	N	T	N	G	I	I	D	M	V	T	L	G	L	V	G	V	C	K	T	G	A	E	V	H	E	H	I	D	E	G	L	F	K	R	L	G	L
Template Known Secondary structure												G	G	G																		T		S						S	S	S		.		S									T	T									S	S													T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.		.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
				352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.			.	.	.	.		.	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure		.	.																																		.	.					.			.	.
Query SS confidence		.	.																																		.	.					.			.	.
Query Sequence		.	.	T	V	S	E	E	E	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L	A	E	F	S	Q	R	.	.	S	R	A	A	.	Y	S	.	.	G	Q	Q	M	L	E	E	Y	V	N	F	Y	Q	N	L
Query Conservation		.	.																																		.	.					.			.	.
Alig confidence		.	.																																		.	.					.			.	.
Template Conservation
Template Sequence		P	E	W	L	I	A	N	T	V	D	E	Y	V	E	R	A	V	R	L	A	E	N	H	Q	E	R	L	E	L	R	R	Y	I	I	E	N	N	G	L	N	T	L	F	T	G	D	P	R	P	M	G	Q	V	F	L	E	K	L	N	A	F
Template Known Secondary structure			G	G	G			S	S																												S		T							S			T
Template Predicted Secondary structure
Template SS confidence
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions