Job Description P71237 Confidence 96.67% Date Thu Jan 5 12:12:28 GMT 2012 Rank 53 Aligned Residues 221 % Identity 12% Template c3l7mC_ PDB info PDB header:structural protein Chain: C: PDB Molecule:teichoic acid biosynthesis protein f; PDBTitle: structure of the wall teichoic acid polymerase tagf, h548a Resolution 2.85 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.			.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.								.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																															.	.	.	.	.	.	.
Query SS confidence																																	.	.																															.	.	.	.	.	.	.
Query Sequence		V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	.	.	L	Y	G	P	G	R	C	R	I	I	N	N	G	I	D	M	A	T	E	A	I	L	A	D	L	P	P	V	R	E	.	.	.	.	.	.	.	T	Q	G	K	P	K	I	A	V	V
Query Conservation																																	.	.																															.	.	.	.	.	.	.
Alig confidence																																	.	.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	K	Y	K	R	N	F	N	R	E	T	S	R	W	D	Y	L	I	S	P	N	R	Y	S	T	E	I	F	R	S	A	F	W	M	D	E	E	R	I	L	E	I	G	Y	P	R	N	D	V	L	V	N	R	A	N	D	Q	E	Y	L	D	E	I	R	T	H	L	N	L	P	S	D	K	K	V	I	M	Y	A
Template Known Secondary structure														T	T		S					S	S											T	T			G	G	G				S			G	G	G						S	T	T												T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.
		248	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.					.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																								.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.																								.	.	.	.
Query Sequence		A	H	D	L	R	Y	D	G	.	.	.	.	.	.	.	.	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	.	.	.	.	K	F	S	P	F	T	A	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A	L	N	Q	M	D	A	L	V	F	S	S	R
Query Conservation										.	.	.	.	.	.	.	.																								.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																								.	.	.	.																																					.
Template Conservation																																																																																	.
Template Sequence		P	T	W	R	D	D	E	F	V	S	K	G	K	Y	L	F	E	L	K	I	D	L	D	N	L	Y	K	E	L	G	D	D	Y	V	I	L	L	R	M	A	Y	L	I	S	N	A	L	D	L	S	G	Y	E	N	F	A	I	D	V	S	N	Y	N	D	V	S	E	L	F	L	I	S	D	C	L	I	T	D	Y	.
Template Known Secondary structure						G	G	G			G	G	G	S	S					T	T										T	T	T													T	T				T	T		T	T	T					T	T		S								T		S					S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		545	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.											.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	N	Y	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	.	.	.	.	.	.	.	.	.	.	S	D	A	A	R	E	V	L	Q	K	S	G	G	K	T	V	S	E	E	E	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L	A	E	F	S	Q	R	S
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																			.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation		.	.	.	.																																														.	.
Template Sequence		.	.	.	.	S	S	V	M	F	D	Y	G	I	L	K	R	P	Q	F	F	F	A	Y	D	I	D	K	Y	D	K	G	L	R	G	F	Y	M	N	Y	M	E	D	L	P	G	P	I	Y	T	.	.	E	P	Y	G	L	A	K	E	L	K	N	L	D	K	V	Q	Q	Q	Y	Q	E	K	I	D	A	F	Y	D	R
Template Known Secondary structure		.	.	.	.		T	T					G	G	G	T								T	T	T	T	T	T	T	T	T			S	B	S	S		T	T	T	S	S	S	S				S	.	.	S	S
Template Predicted Secondary structure		.	.	.	.																																														.	.
Template SS confidence
						624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.			.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	Y	S	G	Q	Q	M	L	E	E	Y	V	N	F	Y	Q	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	C	S	V	D	N	G	K	A	S	Q	Y	I	G	D	L	I	H	K
Template Known Secondary structure			T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions