Job Description P71237 Confidence 46.46% Date Thu Jan 5 12:12:28 GMT 2012 Rank 342 Aligned Residues 128 % Identity 15% Template c3dfmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:teicoplanin pseudoaglycone deacetylase orf2; PDBTitle: the crystal structure of the zinc inhibited form of2 teicoplanin deacetylase orf2 Resolution 2.01 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	L	D	L	H	Q	R	A	L	Q	Q	G	L	A	S	H	F	V	Y	G	Y	G	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.
Template Sequence		R	L	L	A	I	S	P	H	L	D	D	.	.	A	V	L	S	F	G	A	G	L	A	Q	A	A	Q	D	G	A	N	V	L	V	Y	T	V	F	A	G	A	A	Q	P	P	Y	S	P	A	A	Q	R	X	H	T	I	W	G	L	A	P	D	D	D	A	V	L	Y	R	R	K	E	D	I	A	A	L	D	H	L
Template Known Secondary structure								S	S	T	T		.	.															T	T								S	S						S	S												T	T	S		T	T	S
Template Predicted Secondary structure													.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
												43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T	A	M	A	N	I	A	L	F	R	L	F	N	R	D	L	F	G	N	F	N	E	L	Y	R	T	I	T	R	T	A	G	P	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S
Query Conservation		.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																														.
Template Conservation																																																																									.
Template Sequence		R	V	A	H	R	H	G	R	F	L	D	S	I	Y	R	K	L	P	D	G	R	W	L	T	A	H	V	E	G	R	Q	K	L	A	V	N	D	H	S	P	D	S	D	H	D	L	V	G	E	V	A	D	D	I	R	S	I	I	D	E	F	D	P	T	L	V	V	T	C	A	A	.	I	G	E	H	P	D	H	E
Template Known Secondary structure		T											G	G	G		B		T	T	S		B	S					T	T		S	S																																S								.	T	T
Template Predicted Secondary structure																																																																									.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	R	D	A	A	L	F	A	T	H	E	K	N	V	P	V	R	L	W
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions