Job Description P71237 Confidence 99.72% Date Thu Jan 5 12:12:28 GMT 2012 Rank 37 Aligned Residues 351 % Identity 11% Template c3d0qB_ PDB info PDB header:transferase Chain: B: PDB Molecule:protein calg3; PDBTitle: crystal structure of calg3 from micromonospora echinospora determined2 in space group i222 Resolution 2.79 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	L	D	L	H	Q	R	A	L	Q	Q	G	L	A	S	H	F	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	G	K	G	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.
Template Sequence		R	V	L	F	V	S	.	.	S	P	G	I	G	H	L	F	P	L	I	Q	L	A	W	G	F	R	T	A	G	H	D	V	L	I	A	V	A	E	H	A	D	R	A	A	A	A	G	L	E	V	V	D	V	A	P	D	Y	S	A	V	K	V	F	E	Q	V	A	K	D	N	P	R	F	A	E	T	V	A	T	R
Template Known Secondary structure								.	.		S	S	T	T	S	S	G	G	G										T	T								S	S							T	T	T						S		T	T															T	T	S	T	T	T	G	G	G	S
Template Predicted Secondary structure								.	.
Template SS confidence
		0	.	.	.	.	.			.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	A	N	I	A	L	F	R	L	F	N	R	D	L	F	G	N	F	N	E	L	Y	R	T	I	T	R	T	A	G	P	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S	V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T	L	H	D	H	W	S	V	T	G	R	C
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	I	D	L	E	E	W	G	V	Q	I	A	A	V	N	R	P	L	V	D	G	T	X	A	L	V	D	D	Y	R	P	D	L	V	V	Y	E	.	.	.	.	.	.	.	.	.	.	.	Q	G	A	T	V	G	L	L	A	A	D	R	A	G	V	P	A	V	Q	R	N	Q	S	A	W	R	T	R	G	X	H
Template Known Secondary structure				S		G	G	G	G									G	G	G														S						.	.	.	.	.	.	.	.	.	.	.	T	T												T									S	S				T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	T	D	G	C	E	G	W	K	T	G	C	Q	K	C	P	T	L	N	N	Y	P	P	V	K	I	D	R	A	H	Q	L	V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	L	Y	G	P	G	R	C	R	I	I	N	N	G	I	D	M
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	S	I	A	S	F	L	T	D	L	X	D	K	H	Q	V	S	L	P	E	P	V	A	T	I	E	S	F	P	P	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	E	A	E	P	E	G	W	F	X	R	W	V	P	Y
Template Known Secondary structure							T									T							S					S	S		G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																																	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	E	A	I	L	A	D	L	P	P	V	R	E	T	Q	G	K	P	K	I	A	V	V	A	H	D	L	R	Y	D	G	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	F	T	A	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	G	A	V	L	G	D	R	L	P	P	V	P	A	R	P	E	V	A	I	T	X	G	T	I	E	L	Q	A	F	G	I	G	A	V	E	P	I	I	A	A	A	G	E	V	D	A	D	F	V	L	A	L	G	D	L	D	I	S	P	L	G	T	L	P	R	N	V	R	A	V	G	W	T	P	L	H	T	L
Template Known Secondary structure									S	S						S	S																	G	G	G	T								T	T	S	S	S							T	T				G	G	G		S			T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340						.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		L	N	Q	M	D	A	L	V	F	S	S	R	V	D	N	Y	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	.	.	.	.	.	A	R	E	V	L	Q	K	S	G	G	K	T	V	S	E	E	E	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L
Query Conservation																																							.	.	.	.	.
Alig confidence											.	.	.	.																									.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		L	R	T	C	T	A	V	V	H	.	.	.	.	H	G	G	G	G	T	V	X	T	A	I	D	A	G	I	P	Q	L	L	A	P	D	P	R	D	Q	F	Q	H	T	A	R	E	A	V	S	R	R	G	I	G	L	V	S	T	S	D	K	V	D	A	D	L	L	R	R	L	I	G	D	E	S	L	R	T	A	A
Template Known Secondary structure			T	T							.	.	.	.														T									T	T		T	T												T	S						T	T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		275	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	F	S	Q	R	S	R	A	A	Y	S	G	Q	Q	M	L	E	E	Y	V	N	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	V	R	E	E	X	V	A	L	P	T	P	A	E	T	V	R	R	I	V	E	R
Template Known Secondary structure										T	S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions