Job Description P71237 Confidence 99.82% Date Thu Jan 5 12:12:28 GMT 2012 Rank 35 Aligned Residues 328 % Identity 12% Template c2vsnB_ PDB info PDB header:transferase Chain: B: PDB Molecule:xcogt; PDBTitle: structure and topological arrangement of an o-glcnac2 transferase homolog: insight into molecular control of3 intracellular glycosylation Resolution 2.75 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	L	D	L	H	Q	R	A	L	Q	Q	G	L	A	S	H	F	V	Y	G	Y	G	K	G	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T	A	M	A	N	I	A	L	F	R	L	F	N	R	D	L	F	G	N
Query Conservation
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	G	F	V	S	N	G	F	G	A	H	P	T	G	L	L	T	V	A	L	F	E	A	L	Q	R	R	Q	P	D	L	Q	M	H	L	F	A	T	S	G	D	D	G	S	T	L	R	T	R	L	A	Q	A	S	T	L	H	D	V	T	A	L	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S		S	S	S	S																		T	T								S	S				S									T	T	S						T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	E	L	Y	R	T	I	T	R	T	A	G	P	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S	V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T	L	H	D	H	W	S	V	T	G	R	C	A	F	T	D	G	C	E	G	W	K	T	G	C	Q	K	C	P	T
Query Conservation
Alig confidence		.	.																													.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																													.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	L	A	T	A	K	H	I	R	H	H	G	I	D	L	L	F	D	L	A	G	W	G	G	G	G	R	P	E	.	.	.	.	.	.	.	.	.	V	F	A	L	R	P	A	P	V	Q	V	N	W	L	A	Y	P	G	T	S	G	A	P	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.										T	T		S					S	S		S	S	S	S					.	.	.	.	.	.	.	.	.				T			S	S						S	S	S	S	S					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																													.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.										300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	N	Y	P	P	V	K	I	D	R	A	H	Q	L	V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	L	Y	G	P	G	R	C	R	I	I	N	N	G	I	D	M	A	T	E	A	I	L	A	D	L	P	P	V	R	E	T	Q	G	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	Y	V	L	G	D	A	F	A	L	P	P	A	L	E	P	F	Y	S	.	E	H	V	L	R	L	Q	G	A	F	Q	P	S	D	T	S	R	V	V	A	E	P	P	S	R	T	Q	C	G	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T	S		G	G	G	G	G	G		S	.	S						S	S		S					T	T									T	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
																															324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.													.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	I	A	V	V	A	H	D	L	R	Y	D	G	K	T	.	.	.	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	F	T	A	G	.	.	.	.	.	.	.	.	.	.	.	.	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A	L	N	Q
Query Conservation																		.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	Q	G	V	V	L	C	C	F	N	N	S	Y	K	L	N	P	Q	S	M	A	R	M	L	A	V	L	R	E	V	P	D	S	V	L	W	L	L	S	G	P	G	E	A	D	A	R	L	R	A	F	A	H	A	Q	G	V	D	A	Q	R	L	V	F	M	P	K	L	P	H	P	Q	Y	L	A	R	Y	R	H
Template Known Secondary structure			S	S	S									G	G	G																S	T	T									S	T	T												T	T	S		G	G	G																G	G	G
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.							.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.				.
Query SS confidence																																									.	.	.	.	.	.				.
Query Sequence		M	D	A	L	V	F	S	S	R	V	D	N	Y	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	A	R	E	V	L	.	.	.	.	.	.	Q	K	S	.	G	G	K	T	V	S	E	E	E	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L	A
Query Conservation																																									.	.	.	.	.	.				.
Alig confidence														.																											.	.	.	.	.	.				.							.	.
Template Conservation														.																																											.	.
Template Sequence		A	D	L	F	L	D	T	H	P	Y	N	A	.	H	T	T	A	S	D	A	L	W	T	G	C	P	V	L	T	T	P	G	E	T	F	A	A	R	V	A	G	S	L	N	H	H	L	G	L	D	E	M	N	V	A	.	.	D	D	A	A	F	V	A	K	A	V	A	L	A	S	D	P	A	A	L	T	A	L	H
Template Known Secondary structure			S						S	S	S			.	S										T					B				S	S	G	G	G	S										T		G	G	G	B		S	.	.	S
Template Predicted Secondary structure														.																																											.	.
Template SS confidence
		454	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.			.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		E	F	S	Q	R	S	R	A	A	.	.	.	Y	S	G	Q	Q	M	L	E	E	Y	V	N	F	Y	Q	N	L
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		A	R	V	D	V	L	R	R	A	S	G	V	F	H	M	D	G	F	A	D	D	F	G	A	L	L	Q	A	L
Template Known Secondary structure											S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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