Job Description P71237 Confidence 99.96% Date Thu Jan 5 12:12:28 GMT 2012 Rank 20 Aligned Residues 332 % Identity 13% Template c2q6vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucuronosyltransferase gumk; PDBTitle: crystal structure of gumk in complex with udp Resolution 2.28 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.
Query Sequence		M	N	I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	L	D	L	H	Q	R	A	L	Q	Q	G	L	A	S	H	F	V	Y	G	Y	G	K	.	.	.	.	.	.	G	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T	A	M	A	N	I	A	L	F	R	L	F
Query Conservation																																											.	.	.	.	.	.
Alig confidence													.																														.	.	.	.	.	.
Template Conservation													.
Template Sequence		C	Y	L	V	L	S	S	H	D	F	R	.	T	P	R	R	A	N	I	H	F	I	T	D	Q	L	A	L	R	G	T	T	R	F	F	S	L	R	Y	S	R	L	S	R	M	K	G	D	M	R	L	P	L	D	D	T	A	N	T	V	V	S	H	N	G	V	D	C	Y	L	W	R	T	T	V	H	P	F	N	T
Template Known Secondary structure								S	S		T	T	.		S	S															S								S		B	S	G	G	G	T	T	T		T	T	G	G	G	G	G	G	T	T	S					T	T								B	S	S
Template Predicted Secondary structure													.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		N	R	D	L	F	G	N	F	N	E	L	Y	R	T	I	T	R	T	.	.	.	.	.	.	.	.	.	.	A	G	P	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S	V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T	L	H	D	H	W	S	V	T	G	R	C	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Sequence		R	R	S	W	L	R	P	V	E	D	A	M	F	R	W	Y	A	A	H	P	P	K	Q	L	L	D	W	M	R	E	S	D	V	I	V	F	E	S	.	.	.	.	.	.	.	.	G	I	A	V	A	F	I	E	L	A	K	R	V	N	P	A	A	K	L	V	Y	R	A	S	D	G	L	S	T	.	.	.	.	.
Template Known Secondary structure		S		G	G	G																											S						S	.	.	.	.	.	.	.	.	S	G	G	G	G	G									T	T	S							S	S		T	T	T	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.																														.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	D	G	C	E	G	W	K	T	G	C	Q	K	C	P	T	L	N	N	Y	P	P	V	K	I	D	R	A	H	Q	L	V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	L	Y	G	P	G	R	C	R	I	I	N	N	G	I	D	M	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	V	A	S	Y	I	E	R	E	F	D	R	V	A	P	T	L	D	V	I	A	L	V	S	P	A	M	A	.	.	.	A	E	V	V	S	R	D	N	V	F	H	V	G	H	G	V	D	H	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T													G	G	G		S					S		G	G	G	G	.	.	.	G	G		S		S	T	T								B		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
																															162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		T	E	A	I	L	A	D	L	P	P	V	R	E	T	Q	G	K	P	K	I	A	V	V	A	H	D	L	R	Y	D	G	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	F	T	.	.	A	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S
Query Conservation																																																														.	.
Alig confidence								.	.	.	.	.	.																				.	.	.																											.	.
Template Conservation								.	.	.	.	.	.																				.	.	.
Template Sequence		L	D	Q	L	G	D	.	.	.	.	.	.	P	S	P	Y	A	E	G	I	H	A	V	A	V	G	S	M	L	F	D	.	.	.	P	E	F	F	V	V	A	S	K	A	F	P	Q	V	T	F	H	V	I	G	S	G	M	G	R	H	P	G	Y	G	D	N	V	I	V	Y	G	E	M	K	H	A	Q	T	I	G
Template Known Secondary structure						T		.	.	.	.	.	.	S		S			S	S									T	T	B		.	.	.												T	T							S		S	S				T	T			T	T
Template Predicted Secondary structure								.	.	.	.	.	.																				.	.	.
Template SS confidence
		210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		A	L	N	Q	M	D	A	L	V	F	S	S	R	V	D	N	Y	.	.	.	.	.	.	.	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	A	R	E	V	L	Q	K	S	G	G	K	T	V	S	E	E	E	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																																		.	.	.	.
Template Sequence		Y	I	K	H	A	R	F	G	I	A	P	Y	A	S	E	Q	V	P	V	Y	L	A	D	S	S	M	K	L	L	Q	Y	D	F	F	G	L	P	A	V	C	P	N	A	V	V	G	P	Y	.	.	.	.	K	S	R	F	G	Y	T	P	G	N	A	D	S	V	I	A	A	I	T	Q	A	L	E	A	P	R	V	R
Template Known Secondary structure					T		S						B	S		S		S		T	T														T	T							G	G	G	T		S		.	.	.	.	S	S						T	T
Template Predicted Secondary structure																																																		.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	L	A	E	F	S	Q	R	S	R	A	A	Y	S	G	Q	Q	M	L	E	E	Y	V	N
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	.	.	.	.	.	.	.	.	.	Q	C	L	N	W	S	D	T	T	D	R	V	L	D
Template Known Secondary structure			S	.	.	.	.	.	.	.	.	.				B
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		357	.										.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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