Job Description P71237 Confidence 99.86% Date Thu Jan 5 12:12:28 GMT 2012 Rank 32 Aligned Residues 358 % Identity 11% Template c2iyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:oleandomycin glycosyltransferase; PDBTitle: the crystal structure of macrolide glycosyltransferases: a2 blueprint for antibiotic engineering Resolution 1.7 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	Q	F	N	V	R	L	A	E	G	G	A	A	G	V	A	L	D	L	H	Q	R	A	L	Q	Q	G	L	A	S	H	F	V	Y	G	Y	G	K	G	G	K	E	S	V	S	H	Q	N	Y	P	Q	V	I	K	H	T	P	R	M	T	A	M	A	N	I	A	L	F	R	L	F	N	R	D	L	F	G	N
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		H	I	A	M	F	S	.	.	I	A	A	H	G	H	V	N	P	S	L	E	V	I	R	E	L	V	A	R	G	H	R	V	T	Y	A	I	P	P	V	F	A	D	K	V	A	A	T	G	P	R	P	V	L	Y	H	S	T	L	P	G	P	D	A	D	P	E	A	W	G	S	T	L	L	D	N	V	E	P	F	L
Template Known Secondary structure								.	.		S						G	G	G										T	T									G	G	G						T	T	S										S			T	T	S		G	G	G	G		S	S
Template Predicted Secondary structure								.	.
Template SS confidence
		8	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82						.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		F	.	.	.	.	.	N	E	L	Y	R	T	I	T	R	T	A	G	P	V	V	L	H	F	H	V	L	H	S	Y	W	L	N	L	K	S	V	V	R	F	C	E	K	V	K	N	H	K	P	D	V	T	L	V	W	T	L	H	D	H	W	S	V	T	G	R	C	A	F	T	D	G	C	E	G	W	K	T	G	C
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	A	I	Q	A	L	P	Q	L	A	D	A	Y	A	D	D	I	P	D	L	V	L	H	D	.	.	.	.	.	.	.	.	.	.	.	I	T	S	Y	P	A	R	V	L	A	R	R	W	G	V	P	A	V	S	L	S	P	N	L	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T	S			S						.	.	.	.	.	.	.	.	.	.	.	T	T												T								S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110												.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	C	P	T	L	N	N	Y	P	P	V	K	I	D	R	A	H	Q	L	V	A	G	K	R	Q	L	F	R	E	M	L	A	L	G	C	Q	F	I	S	P	S	Q	H	V	A	D	A	F	N	S	L	Y	G	P	G	R	C	R	I	I	N	N	G	I	D	M	A	T	E	A	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																																																			.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	W	K	G	Y	E	E	E	V	A	E	P	M	W	R	E	P	R	Q	T	E	R	G	R	A	Y	Y	A	R	F	E	A	W	L	K	E	N	G	I	T	E	H	P	D	T	F	A	S	H	P	P	R	S	L	V	L	I	P	K	A	L	Q	P	H	A	D	R	V	D	E	D	V	Y	T	F	V
Template Known Secondary structure		.	.	.	.	.		T	T					T											S																	T	T			S										S	S					S		G	G	G	S	T	T	G	G	G	S		T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
			228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	L	A	D	L	P	P	V	R	E	T	Q	G	K	P	K	I	A	V	V	A	H	D	L	R	Y	D	G	K	T	N	Q	Q	L	V	R	E	M	M	A	L	G	D	K	I	E	L	H	T	F	G	K	F	S	P	F	T	A	G	N	V	V	N	H	G	F	E	T	D	K	R	K	L	M	S	A	L	N	Q
Query Conservation		.
Alig confidence		.																																																								.	.
Template Conservation																																																										.	.
Template Sequence		G	A	C	Q	E	G	G	W	Q	R	P	A	G	A	E	K	V	V	L	V	S	L	G	S	A	F	T	Q	P	A	F	Y	R	E	C	V	R	A	F	G	N	L	P	G	W	H	L	V	L	Q	I	G	T	P	A	E	.	.	L	G	E	L	P	D	N	V	E	V	H	D	W	V	P	Q	L	A	I	L	R	Q
Template Known Secondary structure													T	T		S								T	T	T															T	T		T	T										G	G	G	.	.	G		S			T	T					S	S								T	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340					.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.			.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.									.										.	.
Query SS confidence																																				.	.	.	.									.										.	.
Query Sequence		M	D	A	L	V	F	S	S	R	V	D	N	Y	P	L	I	L	C	E	A	L	S	I	G	V	P	V	I	A	T	H	S	D	A	.	.	.	.	A	R	E	V	L	Q	K	S	.	G	G	K	T	V	S	E	E	E	.	.	V	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L	A
Query Conservation																																				.	.	.	.									.										.	.
Alig confidence							.	.	.	.																										.	.	.	.									.										.	.
Template Conservation							.	.	.	.
Template Sequence		A	D	L	F	V	.	.	.	.	T	H	A	G	A	G	G	S	Q	E	G	L	A	T	A	T	P	M	I	A	V	P	Q	A	V	D	Q	F	G	N	A	D	M	L	Q	G	L	G	V	A	R	K	L	A	T	E	E	A	T	A	D	L	L	R	E	T	A	L	A	L	V	D	D	P	E	V	A	R	R	L	R
Template Known Secondary structure			S				.	.	.	.														T	T									S													T	T	S								.
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		299	300	.	.	.					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	S	Q	R	S	R	A	A	Y	S	G	Q	Q	M	L	E	E	Y	V	N	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	Q	A	E	M	A	Q	E	G	G	T	R	R	A	A	D	L	I	E	A	E
Template Known Secondary structure																						T	T
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions