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Job DescriptionP71237
Confidence100.00%DateThu Jan 5 12:12:28 GMT 2012
Rank11Aligned Residues340
% Identity16%Templatec2gejA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10. ........20.........30.........40.........50.........60.........70........
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Query Sequence  MNILQFNVRLA. . EGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDL
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Template Sequence  MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVFG. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 


S
TTS

TT
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   1........10.........20.........30.........40.........50.........60
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  FGNFNELYRTITRTAGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQK
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Template Sequence  . PATHRKVKKWIAEGDFDVLHIHEPNA. . . . . . . . . PSLSMLALQAAEGPIVATFHTSTTK. . . . . . . . . . . . . . . . . . .
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   73......80.........90........ .100.........110.........120...
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  CPTLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIINNGIDMATEAILADLPPVRET
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Template Sequence  . . . . . . . . . . . . . . . SLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEALGS. DAVEIPNGVDVASFADAPLLDGYPRE
Template Known Secondary structure  ...............STTT
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   124.....130.........140.........150.........160. ........170.........180.......
 
   239240.........250.........260.........270.........280.. .......290.........300.........310
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Query Sequence  QGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHTFGKFSP. . . . . . . . FTAGNVVNHGFETDKRKLMSALNQMDAL
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Template Sequence  GRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDATKASAMRSADVYC
Template Known Secondary structure  T
S
TTSGGG

TT
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TGGGGGG

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   188.190.........200.........210.........220.........230.........240.........250.........260.......
 
   311........320.........330.........340........ .350.........360.........370.........380.........
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Query Sequence  VFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS. GGKTVSEEEVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAY
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Template Sequence  APHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRY
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GGGTSS

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   268.270.........280.........290.........300.........310.........320.........330.........340.......
 
   390.........400.....
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Query Sequence  SGQQMLEEYVNFYQNL
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Template Conservation 
           
  
Template Sequence  DWSVVSAQIMRVYETV
Template Known Secondary structure  B
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   348.350.........360...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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