Job Description P71237 Confidence 45.70% Date Thu Jan 5 12:12:28 GMT 2012 Rank 354 Aligned Residues 56 % Identity 18% Template c2f5xC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:bugd; PDBTitle: structure of periplasmic binding protein bugd Resolution 1.72 Å

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		350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																	.	.	.	.
Query SS confidence											.	.	.	.																																	.	.	.	.
Query Sequence		G	K	T	V	S	E	E	E	V	.	.	.	.	L	Q	L	V	Q	L	S	K	P	E	I	A	Q	A	I	F	G	T	T	L	A	E	F	S	Q	R	S	R	A	A	Y	S	.	.	.	.	G	Q	Q	M	L	E	E	Y	V	N	F	Y	Q	N	L
Query Conservation											.	.	.	.																																	.	.	.	.
Alig confidence											.	.	.	.																																	.	.	.	.
Template Conservation
Template Sequence		G	X	W	A	P	K	G	T	P	K	P	V	V	D	K	L	V	K	S	L	Q	A	G	L	A	D	P	K	F	Q	E	R	X	K	Q	L	G	A	E	V	L	T	N	E	A	N	P	E	A	L	Q	A	K	V	K	Q	Q	V	P	Q	W	A	E	L
Template Known Secondary structure							T	T																													T	T					G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions