Job Description P76234 Confidence 58.80% Date Thu Jan 5 12:20:59 GMT 2012 Rank 43 Aligned Residues 138 % Identity 14% Template d1uasa2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.50

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		8	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.						.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60															.	.	.	.	.
Predicted Secondary structure							.																																.	.	.	.	.							.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.																																.	.	.	.	.							.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	G	D	V	.	S	L	P	A	V	G	Q	G	T	W	Y	M	G	E	D	A	S	Q	R	K	T	E	V	A	A	L	R	A	G	I	E	.	.	.	.	.	L	G	L	T	L	I	.	.	D	T	A	E	M	Y	A	D	G	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	V	V	G
Query Conservation							.																																.	.	.	.	.							.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.																																.	.	.	.	.							.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	N	G	L	G	R	T	P	Q	M	G	W	N	S	W	N	H	F	Y	C	G	I	N	E	Q	I	I	R	E	T	A	D	A	L	V	N	T	G	L	A	K	L	G	Y	Q	Y	V	N	I	D	D	C	W	A	E	Y	S	R	D	S	Q	G	N	F	V	P	N	R	Q	T	F	P	S	G	I	K	A	L	A
Template Known Secondary structure				S	S			S	S							S					T	T																	T	S					T								S	S		B		S	S			T	T	S				B		T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		E	A	L	T	G	L	R	E	K	V	F	L	V	S	K	V	Y	P	W	N	A	G	G	.	.	.	.	.	Q	K	A	I	N	A	C	E	A	S	L	R	R	L	N	T	D	Y	L	D	L	Y	L	L	H	W	S	G	S	F	A	F	E	E	T	V	A	A	M	E	K	L	I	A	Q	G	K	I	R	R	W	G
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.
Template Conservation
Template Sequence		D	Y	V	H	A	K	G	L	K	L	G	I	Y	S	D	A	G	S	Q	T	C	S	N	K	M	P	G	S	L	D	H	E	E	Q	D	V	K	T	F	A	S	W	G	V	D	Y	L	K	Y	D	N	C	N	D	A	G	R	S	V	M	E	R	Y	T	R	M	S	N	A	M	K	T	Y	G	K	N	I	F	F	S
Template Known Secondary structure							T	T									S	S	S	B		T	T	S	S	S	B			T	T													T												T	T																			T	T	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		141	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	N	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	E	W	G
Template Known Secondary structure				S	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions