Job Description P76234 Confidence 17.70% Date Thu Jan 5 12:20:59 GMT 2012 Rank 65 Aligned Residues 126 % Identity 10% Template d1r46a2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 3.25

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Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.											.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.																.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	G	D	V	S	.	L	P	A	V	G	Q	G	T	W	Y	M	G	E	D	A	.	.	.	.	.	.	.	.	.	.	S	Q	R	K	T	E	V	A	A	L	R	A	G	I	E	L	.	.	.	.	.	G	L	T	L	I	D	T	A	E	M	Y	A	D	G	G	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation								.																.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.																.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	N	G	L	A	R	T	P	T	M	G	W	L	H	W	E	R	F	M	C	N	L	D	C	Q	E	E	P	D	S	C	I	S	E	K	L	F	M	E	M	A	E	L	M	V	S	E	G	W	K	D	A	G	Y	E	Y	L	C	I	D	D	C	W	M	A	P	Q	R	D	S	E	G	R	L	Q	A	D	P	Q
Template Known Secondary structure				S	S			S	S							S					T	T				T	T	T		T	T	T	S		S														T	T					T								S	S		B		S	S			T	T	S				B		T	T
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.	.	.	.																					.	.	.	.
Query SS confidence		.	.	.	.																					.	.	.	.
Query Sequence		.	.	.	.	A	E	K	V	V	G	E	A	L	T	G	L	R	E	K	V	F	L	V	S	.	.	.	.	K	V	Y	P	W	N	A	G	G	Q	K	A	I	N	A	C	E	A	S	L	R	R	L	N	T	D	Y	L	D	L	Y	L	L	H	W	S	G	S	F	A	F	E	E	T	V	A	A	M	E	K	L	I
Query Conservation		.	.	.	.																					.	.	.	.
Alig confidence		.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		R	F	P	H	G	I	R	Q	L	A	N	Y	V	H	S	K	G	L	K	L	G	I	Y	A	D	V	G	N	K	T	C	A	G	F	P	G	S	F	G	Y	Y	D	I	D	A	Q	T	F	A	D	W	G	V	D	L	L	K	F	D	G	C	Y	C	D	S	L	E	N	L	A	D	G	Y	K	H	M	S	L	A	L
Template Known Secondary structure		T		T	T												T	T									S	S	S	B		T	T	S	S	B			T	T	T												T										S		S	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		132	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		192	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions