|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
. | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
Q | Q | K | M | I | Q | F | S | G | D | V | S | L | P | A | V | G | Q | G | T | W | Y | M | G | E | D | A | S | Q | R | K | T | E | V | A | A | L | R | A | G | I | E | L | G | L | T | L | I | D | T | A | E | M | Y | A | D | G | G | A | E | K | V | V | G | E | A | L | T | G | . |
. |
. |
. |
. |
. |
. |
L | R | E | K |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|
|
|
|   |   |
|
|   |
|   |   |
|   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |
|
|   |   |
|
|   |
|
|   |
|
|   |   |   |
| . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
|   |   |
|
|
|   |   |
|
| . | . | . |
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
I | S | L | R | V | A | L | N | D | G | N | F | I | P | V | L | G | F | G | T | T | V | P | E | . |
. |
K | V | A | K | D | E | V | I | K | A | T | K | I | A | I | D | N | G | F | R | H | F | D | S | A | Y | L | Y | E | . |
. |
. |
V | E | E | E | V | G | Q | A | I | R | S | K | I | E | D | G | T | V | K | R | E | D |
Template Known Secondary structure |   |
G | G |
|  |  |  |
| T | T | S |
|  |  |  | S | S |  |  |  |
|
|
|
| T | . | . | T | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| T | T | T | T | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|  |  |
|  |  |  |  |  |
|
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
  |
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | F | L | V | S | K | V | Y | P | W | N | A | G | G | Q | K | A | I | N | A | C | E | A | S | L | R | R | L | N | T | D | Y | L | D | L | Y | L | L | H | W | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | S | F | A | F | E | E | T | V | A | A | M | E | K | L | I | A | Q | G |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|   |
|
|
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |
|
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|
Template Sequence |   |
I | F | Y | T | S | K | L | W | S | T | F | H | R | P | E | L | V | R | T | C | L | E | K | T | L | K | S | T | Q | L | D | Y | V | D | L | Y | I | I | H | F | P | M | A | L | Q | P | G | D | I | F | F | P | R | D | E | H | G | K | L | L | F | E | T | V | D | I | C | D | T | W | E | A | M | E | K | C | K | D | A | G |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
| G | G | G |
| S | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  | S |
| S |
|  |  |
| S | S | S | S | S | S |
| B |
| T | T |
|
| B |
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | |
|
|
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
K | I | R | R | W | G | V | S | N | L | D | Y | A | D | M | Q | E | L | W | . |
Q | L | P | G | G | N | Q | C | A | T | N | Q | V | L | Y | H | L | G | S | R | G | I | E | Y | D | L | L | P | W | C | Q | Q | Q | Q | M | P | V | M | A | Y | S | P | L | A | Q | A | G | R | L | R | N | G | L | L | K | N | . |
. |
. |
. |
Query Conservation |   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | A | K | S | I | G | V | S | N | F | N | C | R | Q | L | E | R | I | L | N | K | P | G | L | K | Y | K | P | V | C | N | Q | V | E | C | H | L | Y | L | N | . |
. |
Q | S | K | M | L | D | Y | C | K | S | K | D | I | I | L | V | S | Y | C | T | L | G | S | S | R | D | K | T | W | V | D | Q | K | S | P | V | L | L |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  | T |
| T | T |
|
| S |
|
| S |  |  |  |  |  |
| B | T | T | B |
| . | . |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  | S | T | T | S |
|
|
|
| T | T | T | S |
| T | T | S |
|
| G | G |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | |
|
. | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
  |   |
|
|
210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
A | V | V | N | E | I | A | H | A | H | N | I | S | A | A | Q | V | L | L | A | W | V | I | S | H | Q | G | V | M | A | I | P | K | A | A | T | I | A | H | V | Q | Q | N | A | A | V | L | E | V | E | L | S | S | A | E | L | A | M | L | D | K | A | Y | P | A | P | K |
Query Conservation |   |
. | . |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |
|
|   |
|   |
|   |
|
|   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |
| . |   |
|   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|
Template Sequence |   |
D | D | P | V | L | C | A | I | A | K | K | Y | K | Q | T | P | A | L | V | A | L | R | Y | Q | L | Q | R | G | V | V | . |
P | L | I | R | S | F | N | A | K | R | I | K | E | L | T | Q | V | F | E | F | Q | L | A | S | E | D | M | K | A | L | D | G | L | N | R | N | F | R |
Template Known Secondary structure |   |
G |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|  | . |  |  |  |
|
| S |
|  |  |  |  |  |  |  | T | T | T | T | S |
|
|
|
|  |  |  |  |  |  |  |  | T | T |
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | |
. | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . |
  |