Job Description P76234 Confidence 100.00% Date Thu Jan 5 12:20:59 GMT 2012 Rank 40 Aligned Residues 255 % Identity 23% Template c3ln3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydrodiol dehydrogenase; PDBTitle: crystal structure of putative reductase (np_038806.2) from2 mus musculus at 1.18 a resolution Resolution 1.18 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.
Query SS confidence																																																																					.	.	.	.
Query Sequence		K	M	I	Q	F	S	G	D	V	S	L	P	A	V	G	Q	G	T	W	Y	M	G	E	D	A	S	Q	R	K	T	E	V	A	A	L	R	A	G	I	E	L	G	L	T	L	I	D	T	A	E	M	Y	A	D	G	G	A	E	K	V	V	G	E	A	L	T	G	.	.	.	.	L	R	E	K	V	F	L	V	S
Query Conservation																																																																					.	.	.	.
Alig confidence																									.	.	.	.	.	.																									.	.	.												.	.	.	.
Template Conservation																									.	.	.	.	.	.																									.	.	.
Template Sequence		Q	H	C	V	L	N	D	G	H	L	I	P	A	L	G	F	G	T	Y	P	E	V	P	.	.	.	.	.	.	S	S	L	E	A	A	C	L	A	L	D	V	G	Y	R	H	V	D	T	A	Y	A	Y	Q	.	.	.	V	E	E	E	I	G	Q	A	I	Q	S	I	A	G	V	V	R	E	D	L	F	V	T	T
Template Known Secondary structure				B			T	T	S				B	S	S										.	.	.	.	.	.													T								G	G	G	T	.	.	.																		T	T
Template Predicted Secondary structure																									.	.	.	.	.	.																									.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	Y	P	W	N	A	G	G	Q	K	A	I	N	A	C	E	A	S	L	R	R	L	N	T	D	Y	L	D	L	Y	L	L	H	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	S	F	A	F	E	E	T	V	A	A	M	E	K	L	I	A	Q	G	K	I	R	R	W	G	V
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation														.	.	.	.																																																						.	.
Template Sequence		K	L	W	C	T	C	F	R	P	E	L	V	.	.	.	.	P	A	L	E	S	L	L	Q	L	D	Y	V	D	L	Y	I	X	H	Y	P	V	P	X	S	G	D	N	D	F	P	V	N	E	Q	G	S	L	L	D	T	V	D	F	C	D	T	W	E	R	L	E	E	C	.	.	D	A	G	L	V	S	I	G	V
Template Known Secondary structure					G	G	G		S	G	G	G		.	.	.	.										S			S					S		S						S		S	S				T	T																				.	.			S
Template Predicted Secondary structure														.	.	.	.																																																						.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		S	N	L	D	Y	A	D	M	Q	E	L	W	Q	L	P	G	G	N	Q	C	A	T	N	Q	V	L	Y	H	L	G	S	R	G	I	E	Y	D	L	L	P	W	C	Q	Q	Q	Q	M	P	V	M	A	Y	S	P	L	A	Q	A	G	R	L	R	N	G	L	L	K	N	A	V	.	.	V	N	E	I	A	H	A	H
Query Conservation																																																																								.	.
Alig confidence																	.	.																	.	.	.							.																												.	.
Template Conservation																	.	.																	.	.	.							.
Template Sequence		S	N	F	N	H	R	Q	L	E	R	I	L	N	P	G	.	.	L	Y	P	V	C	N	Q	V	E	C	H	L	Y	L	N	Q	.	.	.	R	L	L	D	Y	C	.	E	S	D	I	V	L	V	A	Y	G	A	L	G	T	Q	R	Y	E	W	V	D	Q	N	S	P	V	L	L	N	D	P	V	L	C	D	V	A
Template Known Secondary structure			S														.	.											B	T	T	B			.	.	.							.										S	T	T	S							S		T	T	S			G	G	G
Template Predicted Secondary structure																	.	.																	.	.	.							.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	S	A	A	Q	V	L	L	A	W	V	I	S	H	Q	G	V	M	A	I	P	K	A	A	T	I	A	H	V	Q	Q	N	A	A	V	L	E	V	E	L	S	S	A	E	L	A	M	L	D	K	A	Y	P	A	P	K	G	K	T	A	L	D	M	V
Query Conservation
Alig confidence																		.											.																				.					.	.
Template Conservation																		.											.																				.					.	.
Template Sequence		N	R	S	P	A	L	I	A	L	R	Y	L	I	Q	R	G	.	I	V	P	L	A	Q	S	F	E	N	.	E	X	R	E	N	L	Q	V	F	G	F	Q	L	S	P	E	D	X	T	.	L	D	G	L	.	.	N	N	F	R	Y	L	P	A	E	F	L
Template Known Secondary structure																T	T	.											.						G	G	G	G	G					T	T	T			.	G	G	G	G	.	.					S				G	G	G
Template Predicted Secondary structure																		.											.																				.					.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.			.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions