Return to main results Retrieve Phyre Job Id

Job DescriptionP76234
Confidence7.95%DateThu Jan 5 12:20:59 GMT 2012
Rank99Aligned Residues113
% Identity16%Templatec3ju2A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein smc04130; PDBTitle: crystal structure of protein smc04130 from sinorhizobium meliloti 1021
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50.........60.........70.........80.........90......
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  VGQGTWYMGEDASQRKTEVAALRAGIELGLTLIDTAEMYADGGAEKVVGEALTGLREKVFLVSKVYPWNAGGQKAINACE
Query Conservation 



                 
  

  


 



  

 
  
  

  
          
                 
Alig confidence 











....































































Template Conservation 
     
     .... 
   
  

  
   


                
   

 
                     
Template Sequence  LSINLATIREQC. . . . GFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAI
Template Known Secondary structure  GGGGTTT
....
TT


B
TT
S




SS
Template Predicted Secondary structure 



....



























Template SS confidence 















































































   6...10....... ..20.........30.........40.........50.........60.........70.........80.
 
   97..100. ........110....... ..120.........130...
Predicted Secondary structure  .......











.


Query SS confidence 




. . . . . . .















.















Query Sequence  ASLRR. . . . . . . LNTDYLDLYLLHWSGS. FAFEETVAAMEKLIAQ
Query Conservation   

 
.......
  
 


  

    .         
  
   
Alig confidence 




.......















.















Template Conservation        
  
  

   
                        
  
Template Sequence  DDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAA
Template Known Secondary structure  TBS

B


TT


Template Predicted Secondary structure 















Template SS confidence 












































   82.......90.........100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions