Job Description P76234 Confidence 100.00% Date Thu Jan 5 12:20:59 GMT 2012 Rank 3 Aligned Residues 271 % Identity 27% Template c3erpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: structure of idp01002, a putative oxidoreductase from and essential2 gene of salmonella typhimurium Resolution 1.55 Å

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		2	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.
Predicted Secondary structure									.																																																	.	.																.	.	.	.
Query SS confidence									.																																																	.	.																.	.	.	.
Query Sequence		Q	Q	K	M	I	Q	F	.	S	G	D	V	S	L	P	A	V	G	Q	G	T	W	Y	M	G	E	D	A	S	Q	R	K	T	E	V	A	A	L	R	A	G	I	E	L	G	L	T	L	I	D	T	A	E	M	Y	A	.	.	D	G	G	A	E	K	V	V	G	E	A	L	T	G	L	.	.	.	.	R	E	K
Query Conservation									.																																																	.	.																.	.	.	.
Alig confidence									.																																																	.	.																.	.	.	.
Template Conservation
Template Sequence		T	M	E	Y	R	R	C	G	R	S	G	V	K	L	P	A	I	S	L	G	L	W	H	N	F	G	D	T	T	R	V	E	N	S	R	A	L	L	Q	R	A	F	D	L	G	I	T	H	F	D	L	A	N	N	Y	G	P	P	P	G	S	A	E	C	N	F	G	R	I	L	Q	E	D	F	L	P	W	R	D	E
Template Known Secondary structure		S							S	S	S	S					S						S	S	S		S	T	T	S															T	T								T	T		T	T	T	T	T														T	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		75	.	.	.	.	80	.	.	.	.									.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.																																		.
Query SS confidence												.	.	.	.	.	.	.	.																																		.
Query Sequence		V	F	L	V	S	K	V	Y	P	W	.	.	.	.	.	.	.	.	N	A	G	G	Q	K	A	I	N	A	C	E	A	S	L	R	R	L	N	T	D	Y	L	D	L	Y	L	L	H	W	S	G	S	.	F	A	F	E	E	T	V	A	A	M	E	K	L	I	A	Q	G	K	I	R	R	W	G	V	S	N	L	D
Query Conservation												.	.	.	.	.	.	.	.																																		.
Alig confidence												.	.	.	.	.	.	.	.																																		.
Template Conservation
Template Sequence		L	I	I	S	T	K	A	G	Y	T	M	W	D	G	P	Y	G	D	W	G	S	R	K	Y	L	I	A	S	L	D	Q	S	L	K	R	M	G	L	E	Y	V	D	I	F	Y	H	H	R	P	D	P	E	T	P	L	K	E	T	M	K	A	L	D	H	L	V	R	H	G	K	A	L	Y	V	G	I	S	N	Y	P
Template Known Secondary structure									S	S			S	S	S	T	T	S	S	T	T																	T		S									S			T	T	S															T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		146	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.								.	.	.	.	.
Predicted Secondary structure											.	.																																																										.	.	.	.	.	.	.
Query SS confidence											.	.																																																										.	.	.	.	.	.	.
Query Sequence		Y	A	D	M	Q	E	L	W	Q	.	.	L	P	G	G	N	Q	C	A	T	N	Q	V	L	Y	H	L	G	S	R	G	I	E	Y	D	L	L	P	W	C	Q	Q	Q	Q	M	P	V	M	A	Y	S	P	L	A	Q	A	G	R	L	R	N	G	L	L	K	N	A	V	.	.	.	.	.	.	.	V	N	E	I	A
Query Conservation											.	.																																																										.	.	.	.	.	.	.
Alig confidence											.	.																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	L	A	R	Q	A	I	D	I	L	E	D	L	G	T	P	C	L	I	H	Q	P	K	Y	S	L	F	E	R	W	V	E	D	G	L	L	A	L	L	Q	E	K	G	V	G	S	I	A	F	S	P	L	A	G	G	Q	L	T	D	R	Y	L	N	I	T	A	D	K	L	E	K	V	R	R	L	N	E	L	A
Template Known Secondary structure																T									B		B	T	T	B		G	G	G	G	T									T						B	S	T	T	G	G	G	T	S	S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																							.																				.
Query SS confidence																							.																				.
Query Sequence		H	A	H	N	I	S	A	A	Q	V	L	L	A	W	V	I	S	H	Q	G	V	.	M	A	I	P	K	A	A	T	I	A	H	V	Q	Q	N	A	A	V	L	.	E	V	E	L	S	S	A	E	L	A	M	L	D	K	A	Y
Query Conservation																							.																				.
Alig confidence																							.																				.
Template Conservation
Template Sequence		A	R	R	G	Q	K	L	S	Q	M	A	L	A	W	V	L	R	N	D	N	V	T	S	V	L	I	G	A	S	K	P	S	Q	I	E	D	A	V	G	M	L	A	N	R	R	F	S	A	A	E	C	A	E	I	D	A	I	L
Template Known Secondary structure				T	T												T	T	T	S										S	S										G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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