Job Description P76234 Confidence 16.66% Date Thu Jan 5 12:20:59 GMT 2012 Rank 67 Aligned Residues 181 % Identity 12% Template c2w9mB_ PDB info PDB header:dna replication Chain: B: PDB Molecule:polymerase x; PDBTitle: structure of family x dna polymerase from deinococcus2 radiodurans Resolution 2.46 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.																	.	.	.
Query SS confidence																		.	.	.	.	.																	.	.	.
Query Sequence		E	V	A	A	L	R	A	G	I	E	L	G	L	T	L	I	.	.	.	.	.	D	T	A	E	M	Y	A	D	G	G	A	E	K	V	V	G	.	.	.	E	A	L	T	G	L	R	E	K	V	F	L	V	S	K	V	Y	P	W	N	A	G	G	Q	K	A	I	N	A	C	E	A	S	L	R	R	L	N	T	D
Query Conservation																		.	.	.	.	.																	.	.	.
Alig confidence																		.	.	.	.	.																	.	.	.																																					.	.
Template Conservation																																																																														.	.
Template Sequence		I	R	E	M	A	E	A	T	L	T	L	G	H	E	F	L	G	T	A	D	H	S	R	A	A	Y	Y	A	N	G	L	T	I	E	R	L	R	E	Q	L	K	E	I	R	E	L	Q	R	A	G	L	P	I	V	A	G	S	E	V	D	I	L	D	D	G	S	L	D	F	P	D	D	V	L	G	E	.	.	L	D
Template Known Secondary structure												T	T		S								B	T	T		G	G	G	T		B																		T	T											B		T	T	S		B	S	S						T	T	.	.	S	S
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.			420	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.												.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	D	L	Y	L	L	H	W	S	G	S	F	A	F	E	E	T	V	A	A	M	E	K	L	I	A	Q	G	K	I	R	R	W	G	V	.	.	.	.	.	.	.	.	.	.	.	S	N	L	D	Y	A	D	M	Q	E	L	W	Q	L	P	G	G	N	Q	C	A	T	N	Q	V	L	Y	H	L	G	S	R	G
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																		.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation				.																																																														.	.	.	.
Template Sequence		Y	V	.	V	V	S	V	H	S	N	F	T	L	D	A	A	R	Q	T	E	R	L	I	R	A	V	S	H	P	L	V	T	V	L	G	H	A	T	G	R	L	L	L	R	R	P	G	Y	A	L	D	L	D	A	V	L	G	A	C	E	A	N	G	T	.	.	.	.	V	V	E	I	N	A	N	A	A	R	L	D
Template Known Secondary structure				.						S		T	T	S														T		S	S						S	T	T			B	T	T	T	B																		T		.	.	.	.							S	T	T	T		B
Template Predicted Secondary structure				.																																																														.	.	.	.
Template SS confidence
		422	.		.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.					.	.	.	.	.	490	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	Y	D	L	L	P	W	C	Q	Q	Q	Q	M	P	V	M	A	Y	S	P	L	A	Q	A	G	R	L	R	N	G	L	L	K	N	A	V	V	N	E	I	A	H	A	H	N	I	S	A	A	Q	V
Query Conservation
Alig confidence			.																												.	.	.	.
Template Conservation			.																												.	.	.	.
Template Sequence		L	.	D	W	R	E	A	L	R	W	R	E	R	L	K	F	A	I	N	T	D	A	H	V	P	G	G	L	R	.	.	.	.	D	A	R	Y	G	V	M	Q	A	R	K	A	G	L	T	P	A	H	V
Template Known Secondary structure		S	.									T	T	T										S	S	G	G	G	G	G	.	.	.	.	G											T	T			G	G	G	B
Template Predicted Secondary structure			.																												.	.	.	.
Template SS confidence
		497		.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.					.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions