Job Description P76234 Confidence 100.00% Date Thu Jan 5 12:20:59 GMT 2012 Rank 23 Aligned Residues 263 % Identity 28% Template c1vbjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:prostaglandin f synthase; PDBTitle: the crystal structure of prostaglandin f synthase from2 trypanosoma brucei Resolution 2.10 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	Q	.	Q	K	M	I	Q	F	S	G	D	V	S	L	P	A	V	G	Q	G	T	W	Y	M	G	E	D	A	S	Q	R	K	T	E	V	A	A	L	R	A	G	I	E	L	G	L	T	L	I	D	T	A	E	M	Y	A	D	G	G	A	E	K	V	V	G	E	A	L	T	G	L	R	E	K	V	F	L	V	S
Query Conservation				.
Alig confidence				.																								.	.	.	.
Template Conservation																												.	.	.	.
Template Sequence		M	A	L	T	Q	S	L	K	L	S	N	G	V	M	M	P	V	L	G	F	G	M	W	K	L	Q	.	.	.	.	D	G	N	E	A	E	T	A	T	M	W	A	I	K	S	G	Y	R	H	I	D	T	A	A	I	Y	K	N	E	E	S	A	G	R	A	I	A	S	C	G	V	P	R	E	E	L	F	V	T	T
Template Known Secondary structure											T	T	S					S	B					T	T			.	.	.	.	T	T												T	T	T								G	G	G	T												S	S	S		G	G	G
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	Y	P	W	N	A	G	G	Q	K	A	I	N	A	C	E	A	S	L	R	R	L	N	T	D	Y	L	D	L	Y	L	L	H	W	S	G	S	F	A	F	E	E	T	V	A	A	M	E	K	L	I	A	Q	G	K	I	R	R	W	G	V	S	N	L	D	Y	A	D	M	Q	E	L	W	Q	L	P	G	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	W	N	S	D	Q	G	Y	E	S	T	L	S	A	F	E	K	S	I	K	K	L	G	L	E	Y	V	D	L	Y	L	I	H	W	P	G	K	D	K	F	I	D	T	W	K	A	F	E	K	L	Y	A	D	K	K	V	R	A	I	G	V	S	N	F	H	E	H	H	I	E	E	L	L	K	H	C	K	V	A
Template Known Secondary structure					G	G	G		S															T	T		S								S			T	T	T	T														T	T	S								S										T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	A	T	N	Q	V	L	Y	H	L	G	S	R	G	I	E	Y	D	L	L	P	W	C	Q	Q	Q	Q	M	P	V	M	A	Y	S	P	L	A	Q	A	G	R	L	R	N	G	L	L	K	N	A	V	V	N	E	I	A	H	A	H	N	I	S	A	A	Q	V	L	L	A	W	V	I	S	H	Q	G	V	M	A
Query Conservation
Alig confidence				.	.	.																																							.	.	.	.	.																															.
Template Conservation				.	.	.																																							.	.	.	.	.																															.
Template Sequence		P	M	.	.	.	V	N	Q	I	E	L	H	P	L	L	N	Q	K	A	L	C	E	Y	C	K	S	K	N	I	A	V	T	A	W	S	P	L	G	Q	G	H	L	V	.	.	.	.	.	E	D	A	R	L	K	A	I	G	G	K	Y	G	K	T	A	A	Q	V	M	L	R	W	E	I	Q	A	G	V	I	.	T
Template Known Secondary structure				.	.	.							B	T	T	B												T	T							S	T	T	G	G	G	T	S	T	.	.	.	.	.	T										T	T	T														T	T			.
Template Predicted Secondary structure				.	.	.																																							.	.	.	.	.																															.
Template SS confidence
		157	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.						.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	K	A	A	T	I	A	H	V	Q	Q	N	A	A	V	L	E	V	E	L	S	S	A	E	L	A	M	L	D	K	A	Y	P	A	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	P	K	S	G	N	E	A	R	I	K	E	N	G	N	I	F	D	F	E	L	T	A	E	D	I	Q	V	I	D	G	M	N	A	G	H	R
Template Known Secondary structure						S												S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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